Gene : Cucsa.102570 C. sativus v1.0

Defline:  (1 of 3) KOG1457 - RNA binding protein (contains RRM repeats) Genomic Order:  184
Name:  ? Cucsa.102570 Secondary Identifier:  ? PAC:16958899

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.102570 0.5kb upstream 0.5kb upstream 6564 true scaffold00927: 1585462-1592025 Cucumis sativus
Cucsa.102570 0.5kb upstream 0.5kb upstream 500 false scaffold00927: 1591526-1592025 Cucumis sativus
Cucsa.102570 0.5kb downstream 0.5kb downstream 6564 true scaffold00927: 1584962-1591525 Cucumis sativus
Cucsa.102570 0.5kb downstream 0.5kb downstream 500 false scaffold00927: 1584962-1585461 Cucumis sativus
Cucsa.102570 1.0kb upstream 1.0kb upstream 7064 true scaffold00927: 1585462-1592525 Cucumis sativus
Cucsa.102570 1.0kb upstream 1.0kb upstream 1000 false scaffold00927: 1591526-1592525 Cucumis sativus
Cucsa.102570 1.0kb downstream 1.0kb downstream 7064 true scaffold00927: 1584462-1591525 Cucumis sativus
Cucsa.102570 1.0kb downstream 1.0kb downstream 1000 false scaffold00927: 1584462-1585461 Cucumis sativus
Cucsa.102570 2.0kb upstream 2.0kb upstream 8064 true scaffold00927: 1585462-1593525 Cucumis sativus
Cucsa.102570 2.0kb upstream 2.0kb upstream 2000 false scaffold00927: 1591526-1593525 Cucumis sativus
Cucsa.102570 2.0kb downstream 2.0kb downstream 8064 true scaffold00927: 1583462-1591525 Cucumis sativus
Cucsa.102570 2.0kb downstream 2.0kb downstream 2000 false scaffold00927: 1583462-1585461 Cucumis sativus
Cucsa.102570 5.0kb upstream 5.0kb upstream 11064 true scaffold00927: 1585462-1596525 Cucumis sativus
Cucsa.102570 5.0kb upstream 5.0kb upstream 5000 false scaffold00927: 1591526-1596525 Cucumis sativus
Cucsa.102570 5.0kb downstream 5.0kb downstream 11064 true scaffold00927: 1580462-1591525 Cucumis sativus
Cucsa.102570 5.0kb downstream 5.0kb downstream 5000 false scaffold00927: 1580462-1585461 Cucumis sativus
Cucsa.102570 10.0kb upstream 10.0kb upstream 16064 true scaffold00927: 1585462-1601525 Cucumis sativus
Cucsa.102570 10.0kb upstream 10.0kb upstream 10000 false scaffold00927: 1591526-1601525 Cucumis sativus
Cucsa.102570 10.0kb downstream 10.0kb downstream 16064 true scaffold00927: 1575462-1591525 Cucumis sativus
Cucsa.102570 10.0kb downstream 10.0kb downstream 10000 false scaffold00927: 1575462-1585461 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306423 5265 Fabidae View MSA
124062458 5270 Rosid View MSA
123752952 5271 Pentapetalae View MSA
122789746 5272 Eudicot View MSA
122046185 5273 Angiosperm View MSA
121349255 5274 Embryophyte View MSA
123426318 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain