Gene : Cucsa.098320 C. sativus v1.0
Defline:  (1 of 2) PTHR11558//PTHR11558:SF28 - SPERMIDINE/SPERMINE SYNTHASE Genomic Order:  59
Name:  ? Cucsa.098320 Secondary Identifier:  ? PAC:16958291
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BSUBPOLYAMSYN-PWY Cucumis sativus pathologic  
Csativus POLYAMINSYN3-PWY Cucumis sativus pathologic  
Csativus PWY-7528 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.098320 0.5kb upstream 0.5kb upstream 2112 true scaffold00923: 357901-360012 Cucumis sativus
Cucsa.098320 0.5kb upstream 0.5kb upstream 500 false scaffold00923: 359513-360012 Cucumis sativus
Cucsa.098320 0.5kb downstream 0.5kb downstream 2112 true scaffold00923: 357401-359512 Cucumis sativus
Cucsa.098320 0.5kb downstream 0.5kb downstream 500 false scaffold00923: 357401-357900 Cucumis sativus
Cucsa.098320 1.0kb upstream 1.0kb upstream 2612 true scaffold00923: 357901-360512 Cucumis sativus
Cucsa.098320 1.0kb upstream 1.0kb upstream 1000 false scaffold00923: 359513-360512 Cucumis sativus
Cucsa.098320 1.0kb downstream 1.0kb downstream 2612 true scaffold00923: 356901-359512 Cucumis sativus
Cucsa.098320 1.0kb downstream 1.0kb downstream 1000 false scaffold00923: 356901-357900 Cucumis sativus
Cucsa.098320 2.0kb upstream 2.0kb upstream 3612 true scaffold00923: 357901-361512 Cucumis sativus
Cucsa.098320 2.0kb upstream 2.0kb upstream 2000 false scaffold00923: 359513-361512 Cucumis sativus
Cucsa.098320 2.0kb downstream 2.0kb downstream 3612 true scaffold00923: 355901-359512 Cucumis sativus
Cucsa.098320 2.0kb downstream 2.0kb downstream 2000 false scaffold00923: 355901-357900 Cucumis sativus
Cucsa.098320 5.0kb upstream 5.0kb upstream 6612 true scaffold00923: 357901-364512 Cucumis sativus
Cucsa.098320 5.0kb upstream 5.0kb upstream 5000 false scaffold00923: 359513-364512 Cucumis sativus
Cucsa.098320 5.0kb downstream 5.0kb downstream 6612 true scaffold00923: 352901-359512 Cucumis sativus
Cucsa.098320 5.0kb downstream 5.0kb downstream 5000 false scaffold00923: 352901-357900 Cucumis sativus
Cucsa.098320 10.0kb upstream 10.0kb upstream 11612 true scaffold00923: 357901-369512 Cucumis sativus
Cucsa.098320 10.0kb upstream 10.0kb upstream 10000 false scaffold00923: 359513-369512 Cucumis sativus
Cucsa.098320 10.0kb downstream 10.0kb downstream 11612 true scaffold00923: 347901-359512 Cucumis sativus
Cucsa.098320 10.0kb downstream 10.0kb downstream 10000 false scaffold00923: 347901-357900 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672866 5273 Angiosperm View MSA
122312021 5265 Fabidae View MSA
124070145 5270 Rosid View MSA
123627901 5271 Pentapetalae View MSA
122662235 5272 Eudicot View MSA
120944774 5274 Embryophyte View MSA
122985188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain