Gene : Cucsa.094750 C. sativus v1.0
Defline:  (1 of 2) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE Genomic Order:  110
Name:  ? Cucsa.094750 Secondary Identifier:  ? PAC:16957781
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.094750 0.5kb upstream 0.5kb upstream 5849 true scaffold00919: 864760-870608 Cucumis sativus
Cucsa.094750 0.5kb upstream 0.5kb upstream 500 false scaffold00919: 864760-865259 Cucumis sativus
Cucsa.094750 0.5kb downstream 0.5kb downstream 5849 true scaffold00919: 865260-871108 Cucumis sativus
Cucsa.094750 0.5kb downstream 0.5kb downstream 500 false scaffold00919: 870609-871108 Cucumis sativus
Cucsa.094750 1.0kb upstream 1.0kb upstream 6349 true scaffold00919: 864260-870608 Cucumis sativus
Cucsa.094750 1.0kb upstream 1.0kb upstream 1000 false scaffold00919: 864260-865259 Cucumis sativus
Cucsa.094750 1.0kb downstream 1.0kb downstream 6349 true scaffold00919: 865260-871608 Cucumis sativus
Cucsa.094750 1.0kb downstream 1.0kb downstream 1000 false scaffold00919: 870609-871608 Cucumis sativus
Cucsa.094750 2.0kb upstream 2.0kb upstream 7349 true scaffold00919: 863260-870608 Cucumis sativus
Cucsa.094750 2.0kb upstream 2.0kb upstream 2000 false scaffold00919: 863260-865259 Cucumis sativus
Cucsa.094750 2.0kb downstream 2.0kb downstream 7349 true scaffold00919: 865260-872608 Cucumis sativus
Cucsa.094750 2.0kb downstream 2.0kb downstream 2000 false scaffold00919: 870609-872608 Cucumis sativus
Cucsa.094750 5.0kb upstream 5.0kb upstream 10349 true scaffold00919: 860260-870608 Cucumis sativus
Cucsa.094750 5.0kb upstream 5.0kb upstream 5000 false scaffold00919: 860260-865259 Cucumis sativus
Cucsa.094750 5.0kb downstream 5.0kb downstream 10349 true scaffold00919: 865260-875608 Cucumis sativus
Cucsa.094750 5.0kb downstream 5.0kb downstream 5000 false scaffold00919: 870609-875608 Cucumis sativus
Cucsa.094750 10.0kb upstream 10.0kb upstream 15349 true scaffold00919: 855260-870608 Cucumis sativus
Cucsa.094750 10.0kb upstream 10.0kb upstream 10000 false scaffold00919: 855260-865259 Cucumis sativus
Cucsa.094750 10.0kb downstream 10.0kb downstream 15349 true scaffold00919: 865260-880608 Cucumis sativus
Cucsa.094750 10.0kb downstream 10.0kb downstream 10000 false scaffold00919: 870609-880608 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308357 5265 Fabidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain