Gene : Cucsa.061280 C. sativus v1.0
Defline:  (1 of 34) PF08284 - Retroviral aspartyl protease (RVP_2) Genomic Order:  1
Name:  ? Cucsa.061280 Secondary Identifier:  ? PAC:16954889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.061280 0.5kb upstream 0.5kb upstream 716 true scaffold00648: 1-716 Cucumis sativus
Cucsa.061280 0.5kb upstream 0.5kb upstream 48 false scaffold00648: 1-48 Cucumis sativus
Cucsa.061280 0.5kb downstream 0.5kb downstream 672 true scaffold00648: 49-720 Cucumis sativus
Cucsa.061280 0.5kb downstream 0.5kb downstream 4 false scaffold00648: 717-720 Cucumis sativus
Cucsa.061280 1.0kb upstream 1.0kb upstream 716 true scaffold00648: 1-716 Cucumis sativus
Cucsa.061280 1.0kb upstream 1.0kb upstream 48 false scaffold00648: 1-48 Cucumis sativus
Cucsa.061280 1.0kb downstream 1.0kb downstream 672 true scaffold00648: 49-720 Cucumis sativus
Cucsa.061280 1.0kb downstream 1.0kb downstream 4 false scaffold00648: 717-720 Cucumis sativus
Cucsa.061280 2.0kb upstream 2.0kb upstream 716 true scaffold00648: 1-716 Cucumis sativus
Cucsa.061280 2.0kb upstream 2.0kb upstream 48 false scaffold00648: 1-48 Cucumis sativus
Cucsa.061280 2.0kb downstream 2.0kb downstream 672 true scaffold00648: 49-720 Cucumis sativus
Cucsa.061280 2.0kb downstream 2.0kb downstream 4 false scaffold00648: 717-720 Cucumis sativus
Cucsa.061280 5.0kb upstream 5.0kb upstream 716 true scaffold00648: 1-716 Cucumis sativus
Cucsa.061280 5.0kb upstream 5.0kb upstream 48 false scaffold00648: 1-48 Cucumis sativus
Cucsa.061280 5.0kb downstream 5.0kb downstream 672 true scaffold00648: 49-720 Cucumis sativus
Cucsa.061280 5.0kb downstream 5.0kb downstream 4 false scaffold00648: 717-720 Cucumis sativus
Cucsa.061280 10.0kb upstream 10.0kb upstream 716 true scaffold00648: 1-716 Cucumis sativus
Cucsa.061280 10.0kb upstream 10.0kb upstream 48 false scaffold00648: 1-48 Cucumis sativus
Cucsa.061280 10.0kb downstream 10.0kb downstream 672 true scaffold00648: 49-720 Cucumis sativus
Cucsa.061280 10.0kb downstream 10.0kb downstream 4 false scaffold00648: 717-720 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606417 5273 Angiosperm View MSA
122236687 5265 Fabidae View MSA
123982897 5270 Rosid View MSA
123558571 5271 Pentapetalae View MSA
122593385 5272 Eudicot View MSA
120878707 5274 Embryophyte View MSA
122919596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain