Gene : Cucsa.040600 C. sativus v1.0
Defline:  (1 of 5) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  1
Name:  ? Cucsa.040600 Secondary Identifier:  ? PAC:16952768
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus BSUBPOLYAMSYN-PWY Cucumis sativus pathologic  
Csativus POLYAMINSYN3-PWY Cucumis sativus pathologic  
Csativus PWY-7528 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.040600 0.5kb upstream 0.5kb upstream 4701 true scaffold00529: 10581-15281 Cucumis sativus
Cucsa.040600 0.5kb upstream 0.5kb upstream 500 false scaffold00529: 14782-15281 Cucumis sativus
Cucsa.040600 0.5kb downstream 0.5kb downstream 4701 true scaffold00529: 10081-14781 Cucumis sativus
Cucsa.040600 0.5kb downstream 0.5kb downstream 500 false scaffold00529: 10081-10580 Cucumis sativus
Cucsa.040600 1.0kb upstream 1.0kb upstream 5201 true scaffold00529: 10581-15781 Cucumis sativus
Cucsa.040600 1.0kb upstream 1.0kb upstream 1000 false scaffold00529: 14782-15781 Cucumis sativus
Cucsa.040600 1.0kb downstream 1.0kb downstream 5201 true scaffold00529: 9581-14781 Cucumis sativus
Cucsa.040600 1.0kb downstream 1.0kb downstream 1000 false scaffold00529: 9581-10580 Cucumis sativus
Cucsa.040600 2.0kb upstream 2.0kb upstream 6201 true scaffold00529: 10581-16781 Cucumis sativus
Cucsa.040600 2.0kb upstream 2.0kb upstream 2000 false scaffold00529: 14782-16781 Cucumis sativus
Cucsa.040600 2.0kb downstream 2.0kb downstream 6201 true scaffold00529: 8581-14781 Cucumis sativus
Cucsa.040600 2.0kb downstream 2.0kb downstream 2000 false scaffold00529: 8581-10580 Cucumis sativus
Cucsa.040600 5.0kb upstream 5.0kb upstream 9201 true scaffold00529: 10581-19781 Cucumis sativus
Cucsa.040600 5.0kb upstream 5.0kb upstream 5000 false scaffold00529: 14782-19781 Cucumis sativus
Cucsa.040600 5.0kb downstream 5.0kb downstream 9201 true scaffold00529: 5581-14781 Cucumis sativus
Cucsa.040600 5.0kb downstream 5.0kb downstream 5000 false scaffold00529: 5581-10580 Cucumis sativus
Cucsa.040600 10.0kb upstream 10.0kb upstream 14201 true scaffold00529: 10581-24781 Cucumis sativus
Cucsa.040600 10.0kb upstream 10.0kb upstream 10000 false scaffold00529: 14782-24781 Cucumis sativus
Cucsa.040600 10.0kb downstream 10.0kb downstream 14201 true scaffold00529: 581-14781 Cucumis sativus
Cucsa.040600 10.0kb downstream 10.0kb downstream 10000 false scaffold00529: 581-10580 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121601832 5273 Angiosperm Singleton cluster - no MSA
122232065 5265 Fabidae Singleton cluster - no MSA
123978306 5270 Rosid Singleton cluster - no MSA
123553984 5271 Pentapetalae Singleton cluster - no MSA
122588798 5272 Eudicot Singleton cluster - no MSA
120874123 5274 Embryophyte Singleton cluster - no MSA
122915014 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain