Gene : Cucsa.005540 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  63
Name:  ? Cucsa.005540 Secondary Identifier:  ? PAC:16951166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.005540 0.5kb upstream 0.5kb upstream 1958 true scaffold00055: 608301-610258 Cucumis sativus
Cucsa.005540 0.5kb upstream 0.5kb upstream 500 false scaffold00055: 608301-608800 Cucumis sativus
Cucsa.005540 0.5kb downstream 0.5kb downstream 1958 true scaffold00055: 608801-610758 Cucumis sativus
Cucsa.005540 0.5kb downstream 0.5kb downstream 500 false scaffold00055: 610259-610758 Cucumis sativus
Cucsa.005540 1.0kb upstream 1.0kb upstream 2458 true scaffold00055: 607801-610258 Cucumis sativus
Cucsa.005540 1.0kb upstream 1.0kb upstream 1000 false scaffold00055: 607801-608800 Cucumis sativus
Cucsa.005540 1.0kb downstream 1.0kb downstream 2458 true scaffold00055: 608801-611258 Cucumis sativus
Cucsa.005540 1.0kb downstream 1.0kb downstream 1000 false scaffold00055: 610259-611258 Cucumis sativus
Cucsa.005540 2.0kb upstream 2.0kb upstream 3458 true scaffold00055: 606801-610258 Cucumis sativus
Cucsa.005540 2.0kb upstream 2.0kb upstream 2000 false scaffold00055: 606801-608800 Cucumis sativus
Cucsa.005540 2.0kb downstream 2.0kb downstream 3458 true scaffold00055: 608801-612258 Cucumis sativus
Cucsa.005540 2.0kb downstream 2.0kb downstream 2000 false scaffold00055: 610259-612258 Cucumis sativus
Cucsa.005540 5.0kb upstream 5.0kb upstream 6458 true scaffold00055: 603801-610258 Cucumis sativus
Cucsa.005540 5.0kb upstream 5.0kb upstream 5000 false scaffold00055: 603801-608800 Cucumis sativus
Cucsa.005540 5.0kb downstream 5.0kb downstream 6458 true scaffold00055: 608801-615258 Cucumis sativus
Cucsa.005540 5.0kb downstream 5.0kb downstream 5000 false scaffold00055: 610259-615258 Cucumis sativus
Cucsa.005540 10.0kb upstream 10.0kb upstream 11458 true scaffold00055: 598801-610258 Cucumis sativus
Cucsa.005540 10.0kb upstream 10.0kb upstream 10000 false scaffold00055: 598801-608800 Cucumis sativus
Cucsa.005540 10.0kb downstream 10.0kb downstream 11458 true scaffold00055: 608801-620258 Cucumis sativus
Cucsa.005540 10.0kb downstream 10.0kb downstream 10000 false scaffold00055: 610259-620258 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606623 5273 Angiosperm View MSA
122237301 5265 Fabidae View MSA
123983120 5270 Rosid View MSA
123558781 5271 Pentapetalae View MSA
122593593 5272 Eudicot View MSA
120878913 5274 Embryophyte View MSA
122919800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain