Gene : Cucsa.045960 C. sativus v1.0
Defline:  (1 of 1) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  293
Name:  ? Cucsa.045960 Secondary Identifier:  ? PAC:16953437
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.045960 0.5kb upstream 0.5kb upstream 2114 true scaffold00542: 1605813-1607926 Cucumis sativus
Cucsa.045960 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 1605813-1606312 Cucumis sativus
Cucsa.045960 0.5kb downstream 0.5kb downstream 2114 true scaffold00542: 1606313-1608426 Cucumis sativus
Cucsa.045960 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 1607927-1608426 Cucumis sativus
Cucsa.045960 1.0kb upstream 1.0kb upstream 2614 true scaffold00542: 1605313-1607926 Cucumis sativus
Cucsa.045960 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 1605313-1606312 Cucumis sativus
Cucsa.045960 1.0kb downstream 1.0kb downstream 2614 true scaffold00542: 1606313-1608926 Cucumis sativus
Cucsa.045960 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 1607927-1608926 Cucumis sativus
Cucsa.045960 2.0kb upstream 2.0kb upstream 3614 true scaffold00542: 1604313-1607926 Cucumis sativus
Cucsa.045960 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 1604313-1606312 Cucumis sativus
Cucsa.045960 2.0kb downstream 2.0kb downstream 3614 true scaffold00542: 1606313-1609926 Cucumis sativus
Cucsa.045960 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 1607927-1609926 Cucumis sativus
Cucsa.045960 5.0kb upstream 5.0kb upstream 6614 true scaffold00542: 1601313-1607926 Cucumis sativus
Cucsa.045960 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 1601313-1606312 Cucumis sativus
Cucsa.045960 5.0kb downstream 5.0kb downstream 6614 true scaffold00542: 1606313-1612926 Cucumis sativus
Cucsa.045960 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 1607927-1612926 Cucumis sativus
Cucsa.045960 10.0kb upstream 10.0kb upstream 11614 true scaffold00542: 1596313-1607926 Cucumis sativus
Cucsa.045960 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 1596313-1606312 Cucumis sativus
Cucsa.045960 10.0kb downstream 10.0kb downstream 11614 true scaffold00542: 1606313-1617926 Cucumis sativus
Cucsa.045960 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 1607927-1617926 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299464 5265 Fabidae View MSA
124064645 5270 Rosid View MSA
123751452 5271 Pentapetalae View MSA
122791006 5272 Eudicot View MSA
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain