Gene : Cucsa.397910 C. sativus v1.0
Defline:  (1 of 2) K01176 - alpha-amylase (E3.2.1.1, amyA, malS) Genomic Order:  31
Name:  ? Cucsa.397910 Secondary Identifier:  ? PAC:16983561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.397910 0.5kb upstream 0.5kb upstream 2018 true scaffold04158: 431315-433332 Cucumis sativus
Cucsa.397910 0.5kb upstream 0.5kb upstream 500 false scaffold04158: 432833-433332 Cucumis sativus
Cucsa.397910 0.5kb downstream 0.5kb downstream 2018 true scaffold04158: 430815-432832 Cucumis sativus
Cucsa.397910 0.5kb downstream 0.5kb downstream 500 false scaffold04158: 430815-431314 Cucumis sativus
Cucsa.397910 1.0kb upstream 1.0kb upstream 2518 true scaffold04158: 431315-433832 Cucumis sativus
Cucsa.397910 1.0kb upstream 1.0kb upstream 1000 false scaffold04158: 432833-433832 Cucumis sativus
Cucsa.397910 1.0kb downstream 1.0kb downstream 2518 true scaffold04158: 430315-432832 Cucumis sativus
Cucsa.397910 1.0kb downstream 1.0kb downstream 1000 false scaffold04158: 430315-431314 Cucumis sativus
Cucsa.397910 2.0kb upstream 2.0kb upstream 3518 true scaffold04158: 431315-434832 Cucumis sativus
Cucsa.397910 2.0kb upstream 2.0kb upstream 2000 false scaffold04158: 432833-434832 Cucumis sativus
Cucsa.397910 2.0kb downstream 2.0kb downstream 3518 true scaffold04158: 429315-432832 Cucumis sativus
Cucsa.397910 2.0kb downstream 2.0kb downstream 2000 false scaffold04158: 429315-431314 Cucumis sativus
Cucsa.397910 5.0kb upstream 5.0kb upstream 6518 true scaffold04158: 431315-437832 Cucumis sativus
Cucsa.397910 5.0kb upstream 5.0kb upstream 5000 false scaffold04158: 432833-437832 Cucumis sativus
Cucsa.397910 5.0kb downstream 5.0kb downstream 6518 true scaffold04158: 426315-432832 Cucumis sativus
Cucsa.397910 5.0kb downstream 5.0kb downstream 5000 false scaffold04158: 426315-431314 Cucumis sativus
Cucsa.397910 10.0kb upstream 10.0kb upstream 11518 true scaffold04158: 431315-442832 Cucumis sativus
Cucsa.397910 10.0kb upstream 10.0kb upstream 10000 false scaffold04158: 432833-442832 Cucumis sativus
Cucsa.397910 10.0kb downstream 10.0kb downstream 11518 true scaffold04158: 421315-432832 Cucumis sativus
Cucsa.397910 10.0kb downstream 10.0kb downstream 10000 false scaffold04158: 421315-431314 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606369 5273 Angiosperm Singleton cluster - no MSA
122236639 5265 Fabidae Singleton cluster - no MSA
123982849 5270 Rosid Singleton cluster - no MSA
123558523 5271 Pentapetalae Singleton cluster - no MSA
122593337 5272 Eudicot Singleton cluster - no MSA
120878659 5274 Embryophyte Singleton cluster - no MSA
122919548 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain