Gene : Cucsa.003230 C. sativus v1.0
Defline:  (1 of 10) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Genomic Order:  5
Name:  ? Cucsa.003230 Secondary Identifier:  ? PAC:16950968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.003230 0.5kb upstream 0.5kb upstream 5308 true scaffold00035: 72980-78287 Cucumis sativus
Cucsa.003230 0.5kb upstream 0.5kb upstream 500 false scaffold00035: 77788-78287 Cucumis sativus
Cucsa.003230 0.5kb downstream 0.5kb downstream 5308 true scaffold00035: 72480-77787 Cucumis sativus
Cucsa.003230 0.5kb downstream 0.5kb downstream 500 false scaffold00035: 72480-72979 Cucumis sativus
Cucsa.003230 1.0kb upstream 1.0kb upstream 5808 true scaffold00035: 72980-78787 Cucumis sativus
Cucsa.003230 1.0kb upstream 1.0kb upstream 1000 false scaffold00035: 77788-78787 Cucumis sativus
Cucsa.003230 1.0kb downstream 1.0kb downstream 5808 true scaffold00035: 71980-77787 Cucumis sativus
Cucsa.003230 1.0kb downstream 1.0kb downstream 1000 false scaffold00035: 71980-72979 Cucumis sativus
Cucsa.003230 2.0kb upstream 2.0kb upstream 6808 true scaffold00035: 72980-79787 Cucumis sativus
Cucsa.003230 2.0kb upstream 2.0kb upstream 2000 false scaffold00035: 77788-79787 Cucumis sativus
Cucsa.003230 2.0kb downstream 2.0kb downstream 6808 true scaffold00035: 70980-77787 Cucumis sativus
Cucsa.003230 2.0kb downstream 2.0kb downstream 2000 false scaffold00035: 70980-72979 Cucumis sativus
Cucsa.003230 5.0kb upstream 5.0kb upstream 9808 true scaffold00035: 72980-82787 Cucumis sativus
Cucsa.003230 5.0kb upstream 5.0kb upstream 5000 false scaffold00035: 77788-82787 Cucumis sativus
Cucsa.003230 5.0kb downstream 5.0kb downstream 9808 true scaffold00035: 67980-77787 Cucumis sativus
Cucsa.003230 5.0kb downstream 5.0kb downstream 5000 false scaffold00035: 67980-72979 Cucumis sativus
Cucsa.003230 10.0kb upstream 10.0kb upstream 11735 true scaffold00035: 72980-84714 Cucumis sativus
Cucsa.003230 10.0kb upstream 10.0kb upstream 6927 false scaffold00035: 77788-84714 Cucumis sativus
Cucsa.003230 10.0kb downstream 10.0kb downstream 14808 true scaffold00035: 62980-77787 Cucumis sativus
Cucsa.003230 10.0kb downstream 10.0kb downstream 10000 false scaffold00035: 62980-72979 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310014 5265 Fabidae View MSA
124066129 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain