Gene : Cucsa.394340 C. sativus v1.0
Defline:  (1 of 2) KOG0004 - Ubiquitin/40S ribosomal protein S27a fusion Genomic Order:  51
Name:  ? Cucsa.394340 Secondary Identifier:  ? PAC:16983177
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.394340 0.5kb upstream 0.5kb upstream 1179 true scaffold04100: 321234-322412 Cucumis sativus
Cucsa.394340 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 321913-322412 Cucumis sativus
Cucsa.394340 0.5kb downstream 0.5kb downstream 1179 true scaffold04100: 320734-321912 Cucumis sativus
Cucsa.394340 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 320734-321233 Cucumis sativus
Cucsa.394340 1.0kb upstream 1.0kb upstream 1679 true scaffold04100: 321234-322912 Cucumis sativus
Cucsa.394340 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 321913-322912 Cucumis sativus
Cucsa.394340 1.0kb downstream 1.0kb downstream 1679 true scaffold04100: 320234-321912 Cucumis sativus
Cucsa.394340 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 320234-321233 Cucumis sativus
Cucsa.394340 2.0kb upstream 2.0kb upstream 2679 true scaffold04100: 321234-323912 Cucumis sativus
Cucsa.394340 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 321913-323912 Cucumis sativus
Cucsa.394340 2.0kb downstream 2.0kb downstream 2679 true scaffold04100: 319234-321912 Cucumis sativus
Cucsa.394340 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 319234-321233 Cucumis sativus
Cucsa.394340 5.0kb upstream 5.0kb upstream 5679 true scaffold04100: 321234-326912 Cucumis sativus
Cucsa.394340 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 321913-326912 Cucumis sativus
Cucsa.394340 5.0kb downstream 5.0kb downstream 5679 true scaffold04100: 316234-321912 Cucumis sativus
Cucsa.394340 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 316234-321233 Cucumis sativus
Cucsa.394340 10.0kb upstream 10.0kb upstream 10679 true scaffold04100: 321234-331912 Cucumis sativus
Cucsa.394340 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 321913-331912 Cucumis sativus
Cucsa.394340 10.0kb downstream 10.0kb downstream 10679 true scaffold04100: 311234-321912 Cucumis sativus
Cucsa.394340 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 311234-321233 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306613 5265 Fabidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain