Gene : Cucsa.395170 C. sativus v1.0
Defline:  (1 of 1) PTHR11850:SF92 - HOMEOBOX PROTEIN ATH1 Genomic Order:  135
Name:  ? Cucsa.395170 Secondary Identifier:  ? PAC:16983324
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.395170 0.5kb upstream 0.5kb upstream 4620 true scaffold04100: 799412-804031 Cucumis sativus
Cucsa.395170 0.5kb upstream 0.5kb upstream 500 false scaffold04100: 799412-799911 Cucumis sativus
Cucsa.395170 0.5kb downstream 0.5kb downstream 4620 true scaffold04100: 799912-804531 Cucumis sativus
Cucsa.395170 0.5kb downstream 0.5kb downstream 500 false scaffold04100: 804032-804531 Cucumis sativus
Cucsa.395170 1.0kb upstream 1.0kb upstream 5120 true scaffold04100: 798912-804031 Cucumis sativus
Cucsa.395170 1.0kb upstream 1.0kb upstream 1000 false scaffold04100: 798912-799911 Cucumis sativus
Cucsa.395170 1.0kb downstream 1.0kb downstream 5120 true scaffold04100: 799912-805031 Cucumis sativus
Cucsa.395170 1.0kb downstream 1.0kb downstream 1000 false scaffold04100: 804032-805031 Cucumis sativus
Cucsa.395170 2.0kb upstream 2.0kb upstream 6120 true scaffold04100: 797912-804031 Cucumis sativus
Cucsa.395170 2.0kb upstream 2.0kb upstream 2000 false scaffold04100: 797912-799911 Cucumis sativus
Cucsa.395170 2.0kb downstream 2.0kb downstream 6120 true scaffold04100: 799912-806031 Cucumis sativus
Cucsa.395170 2.0kb downstream 2.0kb downstream 2000 false scaffold04100: 804032-806031 Cucumis sativus
Cucsa.395170 5.0kb upstream 5.0kb upstream 9120 true scaffold04100: 794912-804031 Cucumis sativus
Cucsa.395170 5.0kb upstream 5.0kb upstream 5000 false scaffold04100: 794912-799911 Cucumis sativus
Cucsa.395170 5.0kb downstream 5.0kb downstream 9120 true scaffold04100: 799912-809031 Cucumis sativus
Cucsa.395170 5.0kb downstream 5.0kb downstream 5000 false scaffold04100: 804032-809031 Cucumis sativus
Cucsa.395170 10.0kb upstream 10.0kb upstream 14120 true scaffold04100: 789912-804031 Cucumis sativus
Cucsa.395170 10.0kb upstream 10.0kb upstream 10000 false scaffold04100: 789912-799911 Cucumis sativus
Cucsa.395170 10.0kb downstream 10.0kb downstream 14120 true scaffold04100: 799912-814031 Cucumis sativus
Cucsa.395170 10.0kb downstream 10.0kb downstream 10000 false scaffold04100: 804032-814031 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026468 5273 Angiosperm View MSA
122311728 5265 Fabidae View MSA
124067667 5270 Rosid View MSA
123747040 5271 Pentapetalae View MSA
122793923 5272 Eudicot View MSA
121296345 5274 Embryophyte View MSA
123334524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain