Gene : Cucsa.365250 C. sativus v1.0
Defline:  (1 of 1) KOG0231 - Junctional membrane complex protein Junctophilin and related MORN repeat proteins Genomic Order:  315
Name:  ? Cucsa.365250 Secondary Identifier:  ? PAC:16981384
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6351 Cucumis sativus pathologic  
Csativus PWY-6352 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.365250 0.5kb upstream 0.5kb upstream 2660 true scaffold03611: 2811331-2813990 Cucumis sativus
Cucsa.365250 0.5kb upstream 0.5kb upstream 500 false scaffold03611: 2811331-2811830 Cucumis sativus
Cucsa.365250 0.5kb downstream 0.5kb downstream 2660 true scaffold03611: 2811831-2814490 Cucumis sativus
Cucsa.365250 0.5kb downstream 0.5kb downstream 500 false scaffold03611: 2813991-2814490 Cucumis sativus
Cucsa.365250 1.0kb upstream 1.0kb upstream 3160 true scaffold03611: 2810831-2813990 Cucumis sativus
Cucsa.365250 1.0kb upstream 1.0kb upstream 1000 false scaffold03611: 2810831-2811830 Cucumis sativus
Cucsa.365250 1.0kb downstream 1.0kb downstream 3160 true scaffold03611: 2811831-2814990 Cucumis sativus
Cucsa.365250 1.0kb downstream 1.0kb downstream 1000 false scaffold03611: 2813991-2814990 Cucumis sativus
Cucsa.365250 2.0kb upstream 2.0kb upstream 4160 true scaffold03611: 2809831-2813990 Cucumis sativus
Cucsa.365250 2.0kb upstream 2.0kb upstream 2000 false scaffold03611: 2809831-2811830 Cucumis sativus
Cucsa.365250 2.0kb downstream 2.0kb downstream 4160 true scaffold03611: 2811831-2815990 Cucumis sativus
Cucsa.365250 2.0kb downstream 2.0kb downstream 2000 false scaffold03611: 2813991-2815990 Cucumis sativus
Cucsa.365250 5.0kb upstream 5.0kb upstream 7160 true scaffold03611: 2806831-2813990 Cucumis sativus
Cucsa.365250 5.0kb upstream 5.0kb upstream 5000 false scaffold03611: 2806831-2811830 Cucumis sativus
Cucsa.365250 5.0kb downstream 5.0kb downstream 7160 true scaffold03611: 2811831-2818990 Cucumis sativus
Cucsa.365250 5.0kb downstream 5.0kb downstream 5000 false scaffold03611: 2813991-2818990 Cucumis sativus
Cucsa.365250 10.0kb upstream 10.0kb upstream 12160 true scaffold03611: 2801831-2813990 Cucumis sativus
Cucsa.365250 10.0kb upstream 10.0kb upstream 10000 false scaffold03611: 2801831-2811830 Cucumis sativus
Cucsa.365250 10.0kb downstream 10.0kb downstream 12160 true scaffold03611: 2811831-2823990 Cucumis sativus
Cucsa.365250 10.0kb downstream 10.0kb downstream 10000 false scaffold03611: 2813991-2823990 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605966 5273 Angiosperm Singleton cluster - no MSA
122236233 5265 Fabidae Singleton cluster - no MSA
123982445 5270 Rosid Singleton cluster - no MSA
123558120 5271 Pentapetalae Singleton cluster - no MSA
122592934 5272 Eudicot Singleton cluster - no MSA
120878256 5274 Embryophyte Singleton cluster - no MSA
122919145 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain