Gene : Cucsa.319730 C. sativus v1.0
Defline:  (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  43
Name:  ? Cucsa.319730 Secondary Identifier:  ? PAC:16977286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.319730 0.5kb upstream 0.5kb upstream 3096 true scaffold03078: 418284-421379 Cucumis sativus
Cucsa.319730 0.5kb upstream 0.5kb upstream 500 false scaffold03078: 418284-418783 Cucumis sativus
Cucsa.319730 0.5kb downstream 0.5kb downstream 3096 true scaffold03078: 418784-421879 Cucumis sativus
Cucsa.319730 0.5kb downstream 0.5kb downstream 500 false scaffold03078: 421380-421879 Cucumis sativus
Cucsa.319730 1.0kb upstream 1.0kb upstream 3596 true scaffold03078: 417784-421379 Cucumis sativus
Cucsa.319730 1.0kb upstream 1.0kb upstream 1000 false scaffold03078: 417784-418783 Cucumis sativus
Cucsa.319730 1.0kb downstream 1.0kb downstream 3596 true scaffold03078: 418784-422379 Cucumis sativus
Cucsa.319730 1.0kb downstream 1.0kb downstream 1000 false scaffold03078: 421380-422379 Cucumis sativus
Cucsa.319730 2.0kb upstream 2.0kb upstream 4596 true scaffold03078: 416784-421379 Cucumis sativus
Cucsa.319730 2.0kb upstream 2.0kb upstream 2000 false scaffold03078: 416784-418783 Cucumis sativus
Cucsa.319730 2.0kb downstream 2.0kb downstream 4596 true scaffold03078: 418784-423379 Cucumis sativus
Cucsa.319730 2.0kb downstream 2.0kb downstream 2000 false scaffold03078: 421380-423379 Cucumis sativus
Cucsa.319730 5.0kb upstream 5.0kb upstream 7596 true scaffold03078: 413784-421379 Cucumis sativus
Cucsa.319730 5.0kb upstream 5.0kb upstream 5000 false scaffold03078: 413784-418783 Cucumis sativus
Cucsa.319730 5.0kb downstream 5.0kb downstream 7596 true scaffold03078: 418784-426379 Cucumis sativus
Cucsa.319730 5.0kb downstream 5.0kb downstream 5000 false scaffold03078: 421380-426379 Cucumis sativus
Cucsa.319730 10.0kb upstream 10.0kb upstream 12596 true scaffold03078: 408784-421379 Cucumis sativus
Cucsa.319730 10.0kb upstream 10.0kb upstream 10000 false scaffold03078: 408784-418783 Cucumis sativus
Cucsa.319730 10.0kb downstream 10.0kb downstream 12596 true scaffold03078: 418784-431379 Cucumis sativus
Cucsa.319730 10.0kb downstream 10.0kb downstream 10000 false scaffold03078: 421380-431379 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305367 5265 Fabidae View MSA
124069841 5270 Rosid View MSA
123743244 5271 Pentapetalae View MSA
122795860 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain