Gene : Cucsa.319600 C. sativus v1.0

Defline:  (1 of 45) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  30
Name:  ? Cucsa.319600 Secondary Identifier:  ? PAC:16977265

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.319600 0.5kb upstream 0.5kb upstream 1145 true scaffold03078: 306851-307995 Cucumis sativus
Cucsa.319600 0.5kb upstream 0.5kb upstream 500 false scaffold03078: 306851-307350 Cucumis sativus
Cucsa.319600 0.5kb downstream 0.5kb downstream 1145 true scaffold03078: 307351-308495 Cucumis sativus
Cucsa.319600 0.5kb downstream 0.5kb downstream 500 false scaffold03078: 307996-308495 Cucumis sativus
Cucsa.319600 1.0kb upstream 1.0kb upstream 1645 true scaffold03078: 306351-307995 Cucumis sativus
Cucsa.319600 1.0kb upstream 1.0kb upstream 1000 false scaffold03078: 306351-307350 Cucumis sativus
Cucsa.319600 1.0kb downstream 1.0kb downstream 1645 true scaffold03078: 307351-308995 Cucumis sativus
Cucsa.319600 1.0kb downstream 1.0kb downstream 1000 false scaffold03078: 307996-308995 Cucumis sativus
Cucsa.319600 2.0kb upstream 2.0kb upstream 2645 true scaffold03078: 305351-307995 Cucumis sativus
Cucsa.319600 2.0kb upstream 2.0kb upstream 2000 false scaffold03078: 305351-307350 Cucumis sativus
Cucsa.319600 2.0kb downstream 2.0kb downstream 2645 true scaffold03078: 307351-309995 Cucumis sativus
Cucsa.319600 2.0kb downstream 2.0kb downstream 2000 false scaffold03078: 307996-309995 Cucumis sativus
Cucsa.319600 5.0kb upstream 5.0kb upstream 5645 true scaffold03078: 302351-307995 Cucumis sativus
Cucsa.319600 5.0kb upstream 5.0kb upstream 5000 false scaffold03078: 302351-307350 Cucumis sativus
Cucsa.319600 5.0kb downstream 5.0kb downstream 5645 true scaffold03078: 307351-312995 Cucumis sativus
Cucsa.319600 5.0kb downstream 5.0kb downstream 5000 false scaffold03078: 307996-312995 Cucumis sativus
Cucsa.319600 10.0kb upstream 10.0kb upstream 10645 true scaffold03078: 297351-307995 Cucumis sativus
Cucsa.319600 10.0kb upstream 10.0kb upstream 10000 false scaffold03078: 297351-307350 Cucumis sativus
Cucsa.319600 10.0kb downstream 10.0kb downstream 10645 true scaffold03078: 307351-317995 Cucumis sativus
Cucsa.319600 10.0kb downstream 10.0kb downstream 10000 false scaffold03078: 307996-317995 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306644 5265 Fabidae View MSA
124064891 5270 Rosid View MSA
123747227 5271 Pentapetalae View MSA
122797566 5272 Eudicot View MSA
122045519 5273 Angiosperm View MSA
121310460 5274 Embryophyte View MSA
123347936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain