Gene : Cucsa.319580 C. sativus v1.0
Defline:  (1 of 154) PF08263 - Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  28
Name:  ? Cucsa.319580 Secondary Identifier:  ? PAC:16977263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.319580 0.5kb upstream 0.5kb upstream 1242 true scaffold03078: 285272-286513 Cucumis sativus
Cucsa.319580 0.5kb upstream 0.5kb upstream 500 false scaffold03078: 286014-286513 Cucumis sativus
Cucsa.319580 0.5kb downstream 0.5kb downstream 1242 true scaffold03078: 284772-286013 Cucumis sativus
Cucsa.319580 0.5kb downstream 0.5kb downstream 500 false scaffold03078: 284772-285271 Cucumis sativus
Cucsa.319580 1.0kb upstream 1.0kb upstream 1742 true scaffold03078: 285272-287013 Cucumis sativus
Cucsa.319580 1.0kb upstream 1.0kb upstream 1000 false scaffold03078: 286014-287013 Cucumis sativus
Cucsa.319580 1.0kb downstream 1.0kb downstream 1742 true scaffold03078: 284272-286013 Cucumis sativus
Cucsa.319580 1.0kb downstream 1.0kb downstream 1000 false scaffold03078: 284272-285271 Cucumis sativus
Cucsa.319580 2.0kb upstream 2.0kb upstream 2742 true scaffold03078: 285272-288013 Cucumis sativus
Cucsa.319580 2.0kb upstream 2.0kb upstream 2000 false scaffold03078: 286014-288013 Cucumis sativus
Cucsa.319580 2.0kb downstream 2.0kb downstream 2742 true scaffold03078: 283272-286013 Cucumis sativus
Cucsa.319580 2.0kb downstream 2.0kb downstream 2000 false scaffold03078: 283272-285271 Cucumis sativus
Cucsa.319580 5.0kb upstream 5.0kb upstream 5742 true scaffold03078: 285272-291013 Cucumis sativus
Cucsa.319580 5.0kb upstream 5.0kb upstream 5000 false scaffold03078: 286014-291013 Cucumis sativus
Cucsa.319580 5.0kb downstream 5.0kb downstream 5742 true scaffold03078: 280272-286013 Cucumis sativus
Cucsa.319580 5.0kb downstream 5.0kb downstream 5000 false scaffold03078: 280272-285271 Cucumis sativus
Cucsa.319580 10.0kb upstream 10.0kb upstream 10742 true scaffold03078: 285272-296013 Cucumis sativus
Cucsa.319580 10.0kb upstream 10.0kb upstream 10000 false scaffold03078: 286014-296013 Cucumis sativus
Cucsa.319580 10.0kb downstream 10.0kb downstream 10742 true scaffold03078: 275272-286013 Cucumis sativus
Cucsa.319580 10.0kb downstream 10.0kb downstream 10000 false scaffold03078: 275272-285271 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605381 5273 Angiosperm Singleton cluster - no MSA
122235646 5265 Fabidae Singleton cluster - no MSA
123981860 5270 Rosid Singleton cluster - no MSA
123557535 5271 Pentapetalae Singleton cluster - no MSA
122592349 5272 Eudicot Singleton cluster - no MSA
120877671 5274 Embryophyte Singleton cluster - no MSA
122918560 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain