Gene : Cucsa.319770 C. sativus v1.0
Defline:  (1 of 1) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  47
Name:  ? Cucsa.319770 Secondary Identifier:  ? PAC:16977291
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus POLYAMINSYN3-PWY Cucumis sativus pathologic  
Csativus PWY-43 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.319770 0.5kb upstream 0.5kb upstream 10044 true scaffold03078: 451091-461134 Cucumis sativus
Cucsa.319770 0.5kb upstream 0.5kb upstream 500 false scaffold03078: 451091-451590 Cucumis sativus
Cucsa.319770 0.5kb downstream 0.5kb downstream 10044 true scaffold03078: 451591-461634 Cucumis sativus
Cucsa.319770 0.5kb downstream 0.5kb downstream 500 false scaffold03078: 461135-461634 Cucumis sativus
Cucsa.319770 1.0kb upstream 1.0kb upstream 10544 true scaffold03078: 450591-461134 Cucumis sativus
Cucsa.319770 1.0kb upstream 1.0kb upstream 1000 false scaffold03078: 450591-451590 Cucumis sativus
Cucsa.319770 1.0kb downstream 1.0kb downstream 10544 true scaffold03078: 451591-462134 Cucumis sativus
Cucsa.319770 1.0kb downstream 1.0kb downstream 1000 false scaffold03078: 461135-462134 Cucumis sativus
Cucsa.319770 2.0kb upstream 2.0kb upstream 11544 true scaffold03078: 449591-461134 Cucumis sativus
Cucsa.319770 2.0kb upstream 2.0kb upstream 2000 false scaffold03078: 449591-451590 Cucumis sativus
Cucsa.319770 2.0kb downstream 2.0kb downstream 11544 true scaffold03078: 451591-463134 Cucumis sativus
Cucsa.319770 2.0kb downstream 2.0kb downstream 2000 false scaffold03078: 461135-463134 Cucumis sativus
Cucsa.319770 5.0kb upstream 5.0kb upstream 14544 true scaffold03078: 446591-461134 Cucumis sativus
Cucsa.319770 5.0kb upstream 5.0kb upstream 5000 false scaffold03078: 446591-451590 Cucumis sativus
Cucsa.319770 5.0kb downstream 5.0kb downstream 14544 true scaffold03078: 451591-466134 Cucumis sativus
Cucsa.319770 5.0kb downstream 5.0kb downstream 5000 false scaffold03078: 461135-466134 Cucumis sativus
Cucsa.319770 10.0kb upstream 10.0kb upstream 19544 true scaffold03078: 441591-461134 Cucumis sativus
Cucsa.319770 10.0kb upstream 10.0kb upstream 10000 false scaffold03078: 441591-451590 Cucumis sativus
Cucsa.319770 10.0kb downstream 10.0kb downstream 19544 true scaffold03078: 451591-471134 Cucumis sativus
Cucsa.319770 10.0kb downstream 10.0kb downstream 10000 false scaffold03078: 461135-471134 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain