Gene : Cucsa.319880 C. sativus v1.0
Defline:  (1 of 1) PTHR10183//PTHR10183:SF299 - CALPAIN Genomic Order:  58
Name:  ? Cucsa.319880 Secondary Identifier:  ? PAC:16977303
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.319880 0.5kb upstream 0.5kb upstream 3448 true scaffold03078: 595154-598601 Cucumis sativus
Cucsa.319880 0.5kb upstream 0.5kb upstream 500 false scaffold03078: 595154-595653 Cucumis sativus
Cucsa.319880 0.5kb downstream 0.5kb downstream 3448 true scaffold03078: 595654-599101 Cucumis sativus
Cucsa.319880 0.5kb downstream 0.5kb downstream 500 false scaffold03078: 598602-599101 Cucumis sativus
Cucsa.319880 1.0kb upstream 1.0kb upstream 3948 true scaffold03078: 594654-598601 Cucumis sativus
Cucsa.319880 1.0kb upstream 1.0kb upstream 1000 false scaffold03078: 594654-595653 Cucumis sativus
Cucsa.319880 1.0kb downstream 1.0kb downstream 3948 true scaffold03078: 595654-599601 Cucumis sativus
Cucsa.319880 1.0kb downstream 1.0kb downstream 1000 false scaffold03078: 598602-599601 Cucumis sativus
Cucsa.319880 2.0kb upstream 2.0kb upstream 4948 true scaffold03078: 593654-598601 Cucumis sativus
Cucsa.319880 2.0kb upstream 2.0kb upstream 2000 false scaffold03078: 593654-595653 Cucumis sativus
Cucsa.319880 2.0kb downstream 2.0kb downstream 4948 true scaffold03078: 595654-600601 Cucumis sativus
Cucsa.319880 2.0kb downstream 2.0kb downstream 2000 false scaffold03078: 598602-600601 Cucumis sativus
Cucsa.319880 5.0kb upstream 5.0kb upstream 7948 true scaffold03078: 590654-598601 Cucumis sativus
Cucsa.319880 5.0kb upstream 5.0kb upstream 5000 false scaffold03078: 590654-595653 Cucumis sativus
Cucsa.319880 5.0kb downstream 5.0kb downstream 7948 true scaffold03078: 595654-603601 Cucumis sativus
Cucsa.319880 5.0kb downstream 5.0kb downstream 5000 false scaffold03078: 598602-603601 Cucumis sativus
Cucsa.319880 10.0kb upstream 10.0kb upstream 12948 true scaffold03078: 585654-598601 Cucumis sativus
Cucsa.319880 10.0kb upstream 10.0kb upstream 10000 false scaffold03078: 585654-595653 Cucumis sativus
Cucsa.319880 10.0kb downstream 10.0kb downstream 12948 true scaffold03078: 595654-608601 Cucumis sativus
Cucsa.319880 10.0kb downstream 10.0kb downstream 10000 false scaffold03078: 598602-608601 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304275 5265 Fabidae View MSA
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain