Gene : Bostr.25542s0079 B. stricta v1.2

Defline:  (1 of 2) PTHR31832:SF5 - B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN Genomic Order:  79
Name:  ? Bostr.25542s0079 Secondary Identifier:  ? PAC:30672150

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25542s0079 0.5kb upstream 0.5kb upstream 2621 true Scaffold25542: 310253-312873 Boechera stricta
Bostr.25542s0079 0.5kb upstream 0.5kb upstream 500 false Scaffold25542: 310253-310752 Boechera stricta
Bostr.25542s0079 0.5kb downstream 0.5kb downstream 2621 true Scaffold25542: 310753-313373 Boechera stricta
Bostr.25542s0079 0.5kb downstream 0.5kb downstream 500 false Scaffold25542: 312874-313373 Boechera stricta
Bostr.25542s0079 1.0kb upstream 1.0kb upstream 3121 true Scaffold25542: 309753-312873 Boechera stricta
Bostr.25542s0079 1.0kb upstream 1.0kb upstream 1000 false Scaffold25542: 309753-310752 Boechera stricta
Bostr.25542s0079 1.0kb downstream 1.0kb downstream 3121 true Scaffold25542: 310753-313873 Boechera stricta
Bostr.25542s0079 1.0kb downstream 1.0kb downstream 1000 false Scaffold25542: 312874-313873 Boechera stricta
Bostr.25542s0079 2.0kb upstream 2.0kb upstream 4121 true Scaffold25542: 308753-312873 Boechera stricta
Bostr.25542s0079 2.0kb upstream 2.0kb upstream 2000 false Scaffold25542: 308753-310752 Boechera stricta
Bostr.25542s0079 2.0kb downstream 2.0kb downstream 4121 true Scaffold25542: 310753-314873 Boechera stricta
Bostr.25542s0079 2.0kb downstream 2.0kb downstream 2000 false Scaffold25542: 312874-314873 Boechera stricta
Bostr.25542s0079 5.0kb upstream 5.0kb upstream 7121 true Scaffold25542: 305753-312873 Boechera stricta
Bostr.25542s0079 5.0kb upstream 5.0kb upstream 5000 false Scaffold25542: 305753-310752 Boechera stricta
Bostr.25542s0079 5.0kb downstream 5.0kb downstream 7121 true Scaffold25542: 310753-317873 Boechera stricta
Bostr.25542s0079 5.0kb downstream 5.0kb downstream 5000 false Scaffold25542: 312874-317873 Boechera stricta
Bostr.25542s0079 10.0kb upstream 10.0kb upstream 12121 true Scaffold25542: 300753-312873 Boechera stricta
Bostr.25542s0079 10.0kb upstream 10.0kb upstream 10000 false Scaffold25542: 300753-310752 Boechera stricta
Bostr.25542s0079 10.0kb downstream 10.0kb downstream 12121 true Scaffold25542: 310753-322873 Boechera stricta
Bostr.25542s0079 10.0kb downstream 10.0kb downstream 10000 false Scaffold25542: 312874-322873 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367867 5261 Brassicaceae View MSA
123840914 5264 Brassicales-Malvales View MSA
124338245 5266 SBM View MSA
124249224 5268 Malvidae View MSA
124070942 5270 Rosid View MSA
123749829 5271 Pentapetalae View MSA
122795221 5272 Eudicot View MSA
122046752 5273 Angiosperm View MSA
121348007 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain