Gene : Bostr.19424s0473 B. stricta v1.2
Defline:  (1 of 1) 4.1.3.1 - Isocitrate lyase / Isocitritase Genomic Order:  473
Name:  ? Bostr.19424s0473 Secondary Identifier:  ? PAC:30660831
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0473 0.5kb upstream 0.5kb upstream 3982 true Scaffold19424: 4111168-4115149 Boechera stricta
Bostr.19424s0473 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 4111168-4111667 Boechera stricta
Bostr.19424s0473 0.5kb downstream 0.5kb downstream 3982 true Scaffold19424: 4111668-4115649 Boechera stricta
Bostr.19424s0473 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 4115150-4115649 Boechera stricta
Bostr.19424s0473 1.0kb upstream 1.0kb upstream 4482 true Scaffold19424: 4110668-4115149 Boechera stricta
Bostr.19424s0473 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 4110668-4111667 Boechera stricta
Bostr.19424s0473 1.0kb downstream 1.0kb downstream 4482 true Scaffold19424: 4111668-4116149 Boechera stricta
Bostr.19424s0473 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 4115150-4116149 Boechera stricta
Bostr.19424s0473 2.0kb upstream 2.0kb upstream 5482 true Scaffold19424: 4109668-4115149 Boechera stricta
Bostr.19424s0473 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 4109668-4111667 Boechera stricta
Bostr.19424s0473 2.0kb downstream 2.0kb downstream 5482 true Scaffold19424: 4111668-4117149 Boechera stricta
Bostr.19424s0473 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 4115150-4117149 Boechera stricta
Bostr.19424s0473 5.0kb upstream 5.0kb upstream 8482 true Scaffold19424: 4106668-4115149 Boechera stricta
Bostr.19424s0473 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 4106668-4111667 Boechera stricta
Bostr.19424s0473 5.0kb downstream 5.0kb downstream 8482 true Scaffold19424: 4111668-4120149 Boechera stricta
Bostr.19424s0473 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 4115150-4120149 Boechera stricta
Bostr.19424s0473 10.0kb upstream 10.0kb upstream 13482 true Scaffold19424: 4101668-4115149 Boechera stricta
Bostr.19424s0473 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 4101668-4111667 Boechera stricta
Bostr.19424s0473 10.0kb downstream 10.0kb downstream 13482 true Scaffold19424: 4111668-4125149 Boechera stricta
Bostr.19424s0473 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 4115150-4125149 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375573 5261 Brassicaceae View MSA
123830860 5264 Brassicales-Malvales View MSA
124345344 5266 SBM View MSA
124240855 5268 Malvidae View MSA
124069108 5270 Rosid View MSA
123740253 5271 Pentapetalae View MSA
122791392 5272 Eudicot View MSA
122049985 5273 Angiosperm View MSA
121347561 5274 Embryophyte View MSA
123428552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain