Gene : Bostr.17721s0001 B. stricta v1.2
Defline:  (1 of 1) PTHR11624:SF21 - 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL Genomic Order:  1
Name:  ? Bostr.17721s0001 Secondary Identifier:  ? PAC:30653655
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5046 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.17721s0001 0.5kb upstream 0.5kb upstream 1890 true Scaffold17721: 4491-6380 Boechera stricta
Bostr.17721s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17721: 4491-4990 Boechera stricta
Bostr.17721s0001 0.5kb downstream 0.5kb downstream 1890 true Scaffold17721: 4991-6880 Boechera stricta
Bostr.17721s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold17721: 6381-6880 Boechera stricta
Bostr.17721s0001 1.0kb upstream 1.0kb upstream 2390 true Scaffold17721: 3991-6380 Boechera stricta
Bostr.17721s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold17721: 3991-4990 Boechera stricta
Bostr.17721s0001 1.0kb downstream 1.0kb downstream 1988 true Scaffold17721: 4991-6978 Boechera stricta
Bostr.17721s0001 1.0kb downstream 1.0kb downstream 598 false Scaffold17721: 6381-6978 Boechera stricta
Bostr.17721s0001 2.0kb upstream 2.0kb upstream 3390 true Scaffold17721: 2991-6380 Boechera stricta
Bostr.17721s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold17721: 2991-4990 Boechera stricta
Bostr.17721s0001 2.0kb downstream 2.0kb downstream 1988 true Scaffold17721: 4991-6978 Boechera stricta
Bostr.17721s0001 2.0kb downstream 2.0kb downstream 598 false Scaffold17721: 6381-6978 Boechera stricta
Bostr.17721s0001 5.0kb upstream 5.0kb upstream 6380 true Scaffold17721: 1-6380 Boechera stricta
Bostr.17721s0001 5.0kb upstream 5.0kb upstream 4990 false Scaffold17721: 1-4990 Boechera stricta
Bostr.17721s0001 5.0kb downstream 5.0kb downstream 1988 true Scaffold17721: 4991-6978 Boechera stricta
Bostr.17721s0001 5.0kb downstream 5.0kb downstream 598 false Scaffold17721: 6381-6978 Boechera stricta
Bostr.17721s0001 10.0kb upstream 10.0kb upstream 6380 true Scaffold17721: 1-6380 Boechera stricta
Bostr.17721s0001 10.0kb upstream 10.0kb upstream 4990 false Scaffold17721: 1-4990 Boechera stricta
Bostr.17721s0001 10.0kb downstream 10.0kb downstream 1988 true Scaffold17721: 4991-6978 Boechera stricta
Bostr.17721s0001 10.0kb downstream 10.0kb downstream 598 false Scaffold17721: 6381-6978 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122339295 5261 Brassicaceae Singleton cluster - no MSA
123779793 5264 Brassicales-Malvales Singleton cluster - no MSA
124278108 5266 SBM Singleton cluster - no MSA
124252487 5268 Malvidae View MSA
124039576 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain