Gene : Bostr.12659s0405 B. stricta v1.2

Defline:  (1 of 3) PTHR10648 - SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT Genomic Order:  405
Name:  ? Bostr.12659s0405 Secondary Identifier:  ? PAC:30652474

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0405 0.5kb upstream 0.5kb upstream 4510 true Scaffold12659: 2183543-2188052 Boechera stricta
Bostr.12659s0405 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 2187553-2188052 Boechera stricta
Bostr.12659s0405 0.5kb downstream 0.5kb downstream 4510 true Scaffold12659: 2183043-2187552 Boechera stricta
Bostr.12659s0405 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 2183043-2183542 Boechera stricta
Bostr.12659s0405 1.0kb upstream 1.0kb upstream 5010 true Scaffold12659: 2183543-2188552 Boechera stricta
Bostr.12659s0405 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 2187553-2188552 Boechera stricta
Bostr.12659s0405 1.0kb downstream 1.0kb downstream 5010 true Scaffold12659: 2182543-2187552 Boechera stricta
Bostr.12659s0405 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 2182543-2183542 Boechera stricta
Bostr.12659s0405 2.0kb upstream 2.0kb upstream 6010 true Scaffold12659: 2183543-2189552 Boechera stricta
Bostr.12659s0405 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 2187553-2189552 Boechera stricta
Bostr.12659s0405 2.0kb downstream 2.0kb downstream 6010 true Scaffold12659: 2181543-2187552 Boechera stricta
Bostr.12659s0405 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 2181543-2183542 Boechera stricta
Bostr.12659s0405 5.0kb upstream 5.0kb upstream 9010 true Scaffold12659: 2183543-2192552 Boechera stricta
Bostr.12659s0405 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 2187553-2192552 Boechera stricta
Bostr.12659s0405 5.0kb downstream 5.0kb downstream 9010 true Scaffold12659: 2178543-2187552 Boechera stricta
Bostr.12659s0405 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 2178543-2183542 Boechera stricta
Bostr.12659s0405 10.0kb upstream 10.0kb upstream 14010 true Scaffold12659: 2183543-2197552 Boechera stricta
Bostr.12659s0405 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 2187553-2197552 Boechera stricta
Bostr.12659s0405 10.0kb downstream 10.0kb downstream 14010 true Scaffold12659: 2173543-2187552 Boechera stricta
Bostr.12659s0405 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 2173543-2183542 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511409 5273 Angiosperm View MSA
122376018 5261 Brassicaceae View MSA
123801116 5264 Brassicales-Malvales View MSA
124298453 5266 SBM View MSA
124150090 5268 Malvidae View MSA
123875772 5270 Rosid View MSA
123459544 5271 Pentapetalae View MSA
122494934 5272 Eudicot View MSA
120784456 5274 Embryophyte View MSA
122826369 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain