Gene : Bostr.7867s1627 B. stricta v1.2

Defline:  (1 of 4) 2.3.1.1 - Amino-acid N-acetyltransferase / N-acetylglutamate synthase Genomic Order:  1627
Name:  ? Bostr.7867s1627 Secondary Identifier:  ? PAC:30657706

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSYNBSUB-PWY Boechera stricta pathologic  
Bstricta ARGSYN-PWY Boechera stricta pathologic  
Bstricta GLUTORN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1627 0.5kb upstream 0.5kb upstream 3684 true Scaffold7867: 8239877-8243560 Boechera stricta
Bostr.7867s1627 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 8243061-8243560 Boechera stricta
Bostr.7867s1627 0.5kb downstream 0.5kb downstream 3684 true Scaffold7867: 8239377-8243060 Boechera stricta
Bostr.7867s1627 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 8239377-8239876 Boechera stricta
Bostr.7867s1627 1.0kb upstream 1.0kb upstream 4184 true Scaffold7867: 8239877-8244060 Boechera stricta
Bostr.7867s1627 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 8243061-8244060 Boechera stricta
Bostr.7867s1627 1.0kb downstream 1.0kb downstream 4184 true Scaffold7867: 8238877-8243060 Boechera stricta
Bostr.7867s1627 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 8238877-8239876 Boechera stricta
Bostr.7867s1627 2.0kb upstream 2.0kb upstream 5184 true Scaffold7867: 8239877-8245060 Boechera stricta
Bostr.7867s1627 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 8243061-8245060 Boechera stricta
Bostr.7867s1627 2.0kb downstream 2.0kb downstream 5184 true Scaffold7867: 8237877-8243060 Boechera stricta
Bostr.7867s1627 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 8237877-8239876 Boechera stricta
Bostr.7867s1627 5.0kb upstream 5.0kb upstream 8184 true Scaffold7867: 8239877-8248060 Boechera stricta
Bostr.7867s1627 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 8243061-8248060 Boechera stricta
Bostr.7867s1627 5.0kb downstream 5.0kb downstream 8184 true Scaffold7867: 8234877-8243060 Boechera stricta
Bostr.7867s1627 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 8234877-8239876 Boechera stricta
Bostr.7867s1627 10.0kb upstream 10.0kb upstream 13184 true Scaffold7867: 8239877-8253060 Boechera stricta
Bostr.7867s1627 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 8243061-8253060 Boechera stricta
Bostr.7867s1627 10.0kb downstream 10.0kb downstream 13184 true Scaffold7867: 8229877-8243060 Boechera stricta
Bostr.7867s1627 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 8229877-8239876 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370660 5261 Brassicaceae View MSA
123838224 5264 Brassicales-Malvales View MSA
124337705 5266 SBM View MSA
124237998 5268 Malvidae View MSA
124071227 5270 Rosid View MSA
123741250 5271 Pentapetalae View MSA
122788780 5272 Eudicot View MSA
122042495 5273 Angiosperm View MSA
121347122 5274 Embryophyte View MSA
123426582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain