Gene : Bostr.1460s0177 B. stricta v1.2
Defline:  (1 of 3) PTHR11863:SF33 - LATHOSTEROL OXIDASE Genomic Order:  177
Name:  ? Bostr.1460s0177 Secondary Identifier:  ? PAC:30654623
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2541 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1460s0177 0.5kb upstream 0.5kb upstream 1870 true Scaffold1460: 709084-710953 Boechera stricta
Bostr.1460s0177 0.5kb upstream 0.5kb upstream 500 false Scaffold1460: 709084-709583 Boechera stricta
Bostr.1460s0177 0.5kb downstream 0.5kb downstream 1870 true Scaffold1460: 709584-711453 Boechera stricta
Bostr.1460s0177 0.5kb downstream 0.5kb downstream 500 false Scaffold1460: 710954-711453 Boechera stricta
Bostr.1460s0177 1.0kb upstream 1.0kb upstream 2370 true Scaffold1460: 708584-710953 Boechera stricta
Bostr.1460s0177 1.0kb upstream 1.0kb upstream 1000 false Scaffold1460: 708584-709583 Boechera stricta
Bostr.1460s0177 1.0kb downstream 1.0kb downstream 2370 true Scaffold1460: 709584-711953 Boechera stricta
Bostr.1460s0177 1.0kb downstream 1.0kb downstream 1000 false Scaffold1460: 710954-711953 Boechera stricta
Bostr.1460s0177 2.0kb upstream 2.0kb upstream 3370 true Scaffold1460: 707584-710953 Boechera stricta
Bostr.1460s0177 2.0kb upstream 2.0kb upstream 2000 false Scaffold1460: 707584-709583 Boechera stricta
Bostr.1460s0177 2.0kb downstream 2.0kb downstream 3370 true Scaffold1460: 709584-712953 Boechera stricta
Bostr.1460s0177 2.0kb downstream 2.0kb downstream 2000 false Scaffold1460: 710954-712953 Boechera stricta
Bostr.1460s0177 5.0kb upstream 5.0kb upstream 6370 true Scaffold1460: 704584-710953 Boechera stricta
Bostr.1460s0177 5.0kb upstream 5.0kb upstream 5000 false Scaffold1460: 704584-709583 Boechera stricta
Bostr.1460s0177 5.0kb downstream 5.0kb downstream 6370 true Scaffold1460: 709584-715953 Boechera stricta
Bostr.1460s0177 5.0kb downstream 5.0kb downstream 5000 false Scaffold1460: 710954-715953 Boechera stricta
Bostr.1460s0177 10.0kb upstream 10.0kb upstream 11370 true Scaffold1460: 699584-710953 Boechera stricta
Bostr.1460s0177 10.0kb upstream 10.0kb upstream 10000 false Scaffold1460: 699584-709583 Boechera stricta
Bostr.1460s0177 10.0kb downstream 10.0kb downstream 11370 true Scaffold1460: 709584-720953 Boechera stricta
Bostr.1460s0177 10.0kb downstream 10.0kb downstream 10000 false Scaffold1460: 710954-720953 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512031 5273 Angiosperm View MSA
122380097 5261 Brassicaceae View MSA
123802558 5264 Brassicales-Malvales View MSA
124299745 5266 SBM View MSA
124151074 5268 Malvidae View MSA
123876583 5270 Rosid View MSA
123460240 5271 Pentapetalae View MSA
122495617 5272 Eudicot View MSA
120785057 5274 Embryophyte View MSA
123426408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain