Gene : Bostr.1460s0176 B. stricta v1.2
Defline:  (1 of 3) PTHR11863:SF33 - LATHOSTEROL OXIDASE Genomic Order:  176
Name:  ? Bostr.1460s0176 Secondary Identifier:  ? PAC:30654641
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2541 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1460s0176 0.5kb upstream 0.5kb upstream 2528 true Scaffold1460: 706476-709003 Boechera stricta
Bostr.1460s0176 0.5kb upstream 0.5kb upstream 500 false Scaffold1460: 706476-706975 Boechera stricta
Bostr.1460s0176 0.5kb downstream 0.5kb downstream 2528 true Scaffold1460: 706976-709503 Boechera stricta
Bostr.1460s0176 0.5kb downstream 0.5kb downstream 500 false Scaffold1460: 709004-709503 Boechera stricta
Bostr.1460s0176 1.0kb upstream 1.0kb upstream 3028 true Scaffold1460: 705976-709003 Boechera stricta
Bostr.1460s0176 1.0kb upstream 1.0kb upstream 1000 false Scaffold1460: 705976-706975 Boechera stricta
Bostr.1460s0176 1.0kb downstream 1.0kb downstream 3028 true Scaffold1460: 706976-710003 Boechera stricta
Bostr.1460s0176 1.0kb downstream 1.0kb downstream 1000 false Scaffold1460: 709004-710003 Boechera stricta
Bostr.1460s0176 2.0kb upstream 2.0kb upstream 4028 true Scaffold1460: 704976-709003 Boechera stricta
Bostr.1460s0176 2.0kb upstream 2.0kb upstream 2000 false Scaffold1460: 704976-706975 Boechera stricta
Bostr.1460s0176 2.0kb downstream 2.0kb downstream 4028 true Scaffold1460: 706976-711003 Boechera stricta
Bostr.1460s0176 2.0kb downstream 2.0kb downstream 2000 false Scaffold1460: 709004-711003 Boechera stricta
Bostr.1460s0176 5.0kb upstream 5.0kb upstream 7028 true Scaffold1460: 701976-709003 Boechera stricta
Bostr.1460s0176 5.0kb upstream 5.0kb upstream 5000 false Scaffold1460: 701976-706975 Boechera stricta
Bostr.1460s0176 5.0kb downstream 5.0kb downstream 7028 true Scaffold1460: 706976-714003 Boechera stricta
Bostr.1460s0176 5.0kb downstream 5.0kb downstream 5000 false Scaffold1460: 709004-714003 Boechera stricta
Bostr.1460s0176 10.0kb upstream 10.0kb upstream 12028 true Scaffold1460: 696976-709003 Boechera stricta
Bostr.1460s0176 10.0kb upstream 10.0kb upstream 10000 false Scaffold1460: 696976-706975 Boechera stricta
Bostr.1460s0176 10.0kb downstream 10.0kb downstream 12028 true Scaffold1460: 706976-719003 Boechera stricta
Bostr.1460s0176 10.0kb downstream 10.0kb downstream 10000 false Scaffold1460: 709004-719003 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380933 5261 Brassicaceae View MSA
123833662 5264 Brassicales-Malvales View MSA
124343580 5266 SBM View MSA
124244267 5268 Malvidae View MSA
124064501 5270 Rosid View MSA
123737872 5271 Pentapetalae View MSA
122793371 5272 Eudicot View MSA
122046142 5273 Angiosperm View MSA
121347239 5274 Embryophyte View MSA
123426408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain