Gene : Bostr.3359s0115 B. stricta v1.2
Defline:  (1 of 1) PTHR11817:SF26 - PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC Genomic Order:  115
Name:  ? Bostr.3359s0115 Secondary Identifier:  ? PAC:30655132
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ANAEROFRUCAT-PWY Boechera stricta pathologic  
Bstricta ANAGLYCOLYSIS-PWY Boechera stricta pathologic  
Bstricta PWY-1042 Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-5723 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3359s0115 0.5kb upstream 0.5kb upstream 3621 true Scaffold3359: 1221043-1224663 Boechera stricta
Bostr.3359s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 1224164-1224663 Boechera stricta
Bostr.3359s0115 0.5kb downstream 0.5kb downstream 3621 true Scaffold3359: 1220543-1224163 Boechera stricta
Bostr.3359s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 1220543-1221042 Boechera stricta
Bostr.3359s0115 1.0kb upstream 1.0kb upstream 4121 true Scaffold3359: 1221043-1225163 Boechera stricta
Bostr.3359s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 1224164-1225163 Boechera stricta
Bostr.3359s0115 1.0kb downstream 1.0kb downstream 4121 true Scaffold3359: 1220043-1224163 Boechera stricta
Bostr.3359s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 1220043-1221042 Boechera stricta
Bostr.3359s0115 2.0kb upstream 2.0kb upstream 5121 true Scaffold3359: 1221043-1226163 Boechera stricta
Bostr.3359s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 1224164-1226163 Boechera stricta
Bostr.3359s0115 2.0kb downstream 2.0kb downstream 5121 true Scaffold3359: 1219043-1224163 Boechera stricta
Bostr.3359s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 1219043-1221042 Boechera stricta
Bostr.3359s0115 5.0kb upstream 5.0kb upstream 8121 true Scaffold3359: 1221043-1229163 Boechera stricta
Bostr.3359s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 1224164-1229163 Boechera stricta
Bostr.3359s0115 5.0kb downstream 5.0kb downstream 8121 true Scaffold3359: 1216043-1224163 Boechera stricta
Bostr.3359s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 1216043-1221042 Boechera stricta
Bostr.3359s0115 10.0kb upstream 10.0kb upstream 13121 true Scaffold3359: 1221043-1234163 Boechera stricta
Bostr.3359s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 1224164-1234163 Boechera stricta
Bostr.3359s0115 10.0kb downstream 10.0kb downstream 13121 true Scaffold3359: 1211043-1224163 Boechera stricta
Bostr.3359s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 1211043-1221042 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361438 5261 Brassicaceae View MSA
123829651 5264 Brassicales-Malvales View MSA
124338362 5266 SBM View MSA
124243185 5268 Malvidae View MSA
124068540 5270 Rosid View MSA
123739414 5271 Pentapetalae View MSA
122792139 5272 Eudicot View MSA
122048641 5273 Angiosperm View MSA
121350965 5274 Embryophyte View MSA
123423965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain