Gene : Bostr.3279s0009 B. stricta v1.2
Defline:  (1 of 1) KOG4237 - Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats Genomic Order:  9
Name:  ? Bostr.3279s0009 Secondary Identifier:  ? PAC:30654019
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3279s0009 0.5kb upstream 0.5kb upstream 8430 true Scaffold3279: 125910-134339 Boechera stricta
Bostr.3279s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3279: 125910-126409 Boechera stricta
Bostr.3279s0009 0.5kb downstream 0.5kb downstream 8430 true Scaffold3279: 126410-134839 Boechera stricta
Bostr.3279s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3279: 134340-134839 Boechera stricta
Bostr.3279s0009 1.0kb upstream 1.0kb upstream 8930 true Scaffold3279: 125410-134339 Boechera stricta
Bostr.3279s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3279: 125410-126409 Boechera stricta
Bostr.3279s0009 1.0kb downstream 1.0kb downstream 8930 true Scaffold3279: 126410-135339 Boechera stricta
Bostr.3279s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3279: 134340-135339 Boechera stricta
Bostr.3279s0009 2.0kb upstream 2.0kb upstream 9930 true Scaffold3279: 124410-134339 Boechera stricta
Bostr.3279s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3279: 124410-126409 Boechera stricta
Bostr.3279s0009 2.0kb downstream 2.0kb downstream 9930 true Scaffold3279: 126410-136339 Boechera stricta
Bostr.3279s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3279: 134340-136339 Boechera stricta
Bostr.3279s0009 5.0kb upstream 5.0kb upstream 12930 true Scaffold3279: 121410-134339 Boechera stricta
Bostr.3279s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3279: 121410-126409 Boechera stricta
Bostr.3279s0009 5.0kb downstream 5.0kb downstream 12930 true Scaffold3279: 126410-139339 Boechera stricta
Bostr.3279s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3279: 134340-139339 Boechera stricta
Bostr.3279s0009 10.0kb upstream 10.0kb upstream 17930 true Scaffold3279: 116410-134339 Boechera stricta
Bostr.3279s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3279: 116410-126409 Boechera stricta
Bostr.3279s0009 10.0kb downstream 10.0kb downstream 17930 true Scaffold3279: 126410-144339 Boechera stricta
Bostr.3279s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3279: 134340-144339 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122339371 5261 Brassicaceae Singleton cluster - no MSA
123842893 5264 Brassicales-Malvales View MSA
124323845 5266 SBM View MSA
124256465 5268 Malvidae View MSA
124075258 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain