Gene : Brara.A00585 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  585
Name:  ? Brara.A00585 Secondary Identifier:  ? PAC:30639616
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ASPARTATE-DEG1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ASPARTATESYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc THRESYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00585 0.5kb upstream 0.5kb upstream 4454 true A01: 2863673-2868126 Brassica rapa FPsc
Brara.A00585 0.5kb upstream 0.5kb upstream 500 false A01: 2863673-2864172 Brassica rapa FPsc
Brara.A00585 0.5kb downstream 0.5kb downstream 4454 true A01: 2864173-2868626 Brassica rapa FPsc
Brara.A00585 0.5kb downstream 0.5kb downstream 500 false A01: 2868127-2868626 Brassica rapa FPsc
Brara.A00585 1.0kb upstream 1.0kb upstream 4954 true A01: 2863173-2868126 Brassica rapa FPsc
Brara.A00585 1.0kb upstream 1.0kb upstream 1000 false A01: 2863173-2864172 Brassica rapa FPsc
Brara.A00585 1.0kb downstream 1.0kb downstream 4954 true A01: 2864173-2869126 Brassica rapa FPsc
Brara.A00585 1.0kb downstream 1.0kb downstream 1000 false A01: 2868127-2869126 Brassica rapa FPsc
Brara.A00585 2.0kb upstream 2.0kb upstream 5954 true A01: 2862173-2868126 Brassica rapa FPsc
Brara.A00585 2.0kb upstream 2.0kb upstream 2000 false A01: 2862173-2864172 Brassica rapa FPsc
Brara.A00585 2.0kb downstream 2.0kb downstream 5954 true A01: 2864173-2870126 Brassica rapa FPsc
Brara.A00585 2.0kb downstream 2.0kb downstream 2000 false A01: 2868127-2870126 Brassica rapa FPsc
Brara.A00585 5.0kb upstream 5.0kb upstream 8954 true A01: 2859173-2868126 Brassica rapa FPsc
Brara.A00585 5.0kb upstream 5.0kb upstream 5000 false A01: 2859173-2864172 Brassica rapa FPsc
Brara.A00585 5.0kb downstream 5.0kb downstream 8954 true A01: 2864173-2873126 Brassica rapa FPsc
Brara.A00585 5.0kb downstream 5.0kb downstream 5000 false A01: 2868127-2873126 Brassica rapa FPsc
Brara.A00585 10.0kb upstream 10.0kb upstream 13954 true A01: 2854173-2868126 Brassica rapa FPsc
Brara.A00585 10.0kb upstream 10.0kb upstream 10000 false A01: 2854173-2864172 Brassica rapa FPsc
Brara.A00585 10.0kb downstream 10.0kb downstream 13954 true A01: 2864173-2878126 Brassica rapa FPsc
Brara.A00585 10.0kb downstream 10.0kb downstream 10000 false A01: 2868127-2878126 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376883 5261 Brassicaceae View MSA
123833369 5264 Brassicales-Malvales View MSA
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier