Gene : Brara.A00125 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.1 - Amino-acid N-acetyltransferase / N-acetylglutamate synthase Genomic Order:  125
Name:  ? Brara.A00125 Secondary Identifier:  ? PAC:30636355
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSYNBSUB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARGSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUTORN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00125 0.5kb upstream 0.5kb upstream 3173 true A01: 669389-672561 Brassica rapa FPsc
Brara.A00125 0.5kb upstream 0.5kb upstream 500 false A01: 669389-669888 Brassica rapa FPsc
Brara.A00125 0.5kb downstream 0.5kb downstream 3173 true A01: 669889-673061 Brassica rapa FPsc
Brara.A00125 0.5kb downstream 0.5kb downstream 500 false A01: 672562-673061 Brassica rapa FPsc
Brara.A00125 1.0kb upstream 1.0kb upstream 3673 true A01: 668889-672561 Brassica rapa FPsc
Brara.A00125 1.0kb upstream 1.0kb upstream 1000 false A01: 668889-669888 Brassica rapa FPsc
Brara.A00125 1.0kb downstream 1.0kb downstream 3673 true A01: 669889-673561 Brassica rapa FPsc
Brara.A00125 1.0kb downstream 1.0kb downstream 1000 false A01: 672562-673561 Brassica rapa FPsc
Brara.A00125 2.0kb upstream 2.0kb upstream 4673 true A01: 667889-672561 Brassica rapa FPsc
Brara.A00125 2.0kb upstream 2.0kb upstream 2000 false A01: 667889-669888 Brassica rapa FPsc
Brara.A00125 2.0kb downstream 2.0kb downstream 4673 true A01: 669889-674561 Brassica rapa FPsc
Brara.A00125 2.0kb downstream 2.0kb downstream 2000 false A01: 672562-674561 Brassica rapa FPsc
Brara.A00125 5.0kb upstream 5.0kb upstream 7673 true A01: 664889-672561 Brassica rapa FPsc
Brara.A00125 5.0kb upstream 5.0kb upstream 5000 false A01: 664889-669888 Brassica rapa FPsc
Brara.A00125 5.0kb downstream 5.0kb downstream 7673 true A01: 669889-677561 Brassica rapa FPsc
Brara.A00125 5.0kb downstream 5.0kb downstream 5000 false A01: 672562-677561 Brassica rapa FPsc
Brara.A00125 10.0kb upstream 10.0kb upstream 12673 true A01: 659889-672561 Brassica rapa FPsc
Brara.A00125 10.0kb upstream 10.0kb upstream 10000 false A01: 659889-669888 Brassica rapa FPsc
Brara.A00125 10.0kb downstream 10.0kb downstream 12673 true A01: 669889-682561 Brassica rapa FPsc
Brara.A00125 10.0kb downstream 10.0kb downstream 10000 false A01: 672562-682561 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370660 5261 Brassicaceae View MSA
123838224 5264 Brassicales-Malvales View MSA
124337705 5266 SBM View MSA
124237998 5268 Malvidae View MSA
124071227 5270 Rosid View MSA
123741250 5271 Pentapetalae View MSA
122788780 5272 Eudicot View MSA
122042495 5273 Angiosperm View MSA
121347122 5274 Embryophyte View MSA
123426582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier