Gene : Brara.F00374 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10048:SF15 - PHOSPHATIDYLINOSITOL 4-KINASE ALPHA-LIKE PROTEIN P2-RELATED Genomic Order:  374
Name:  ? Brara.F00374 Secondary Identifier:  ? PAC:30627999
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00374 0.5kb upstream 0.5kb upstream 5959 true A06: 2168081-2174039 Brassica rapa FPsc
Brara.F00374 0.5kb upstream 0.5kb upstream 500 false A06: 2168081-2168580 Brassica rapa FPsc
Brara.F00374 0.5kb downstream 0.5kb downstream 5959 true A06: 2168581-2174539 Brassica rapa FPsc
Brara.F00374 0.5kb downstream 0.5kb downstream 500 false A06: 2174040-2174539 Brassica rapa FPsc
Brara.F00374 1.0kb upstream 1.0kb upstream 6459 true A06: 2167581-2174039 Brassica rapa FPsc
Brara.F00374 1.0kb upstream 1.0kb upstream 1000 false A06: 2167581-2168580 Brassica rapa FPsc
Brara.F00374 1.0kb downstream 1.0kb downstream 6459 true A06: 2168581-2175039 Brassica rapa FPsc
Brara.F00374 1.0kb downstream 1.0kb downstream 1000 false A06: 2174040-2175039 Brassica rapa FPsc
Brara.F00374 2.0kb upstream 2.0kb upstream 7459 true A06: 2166581-2174039 Brassica rapa FPsc
Brara.F00374 2.0kb upstream 2.0kb upstream 2000 false A06: 2166581-2168580 Brassica rapa FPsc
Brara.F00374 2.0kb downstream 2.0kb downstream 7459 true A06: 2168581-2176039 Brassica rapa FPsc
Brara.F00374 2.0kb downstream 2.0kb downstream 2000 false A06: 2174040-2176039 Brassica rapa FPsc
Brara.F00374 5.0kb upstream 5.0kb upstream 10459 true A06: 2163581-2174039 Brassica rapa FPsc
Brara.F00374 5.0kb upstream 5.0kb upstream 5000 false A06: 2163581-2168580 Brassica rapa FPsc
Brara.F00374 5.0kb downstream 5.0kb downstream 10459 true A06: 2168581-2179039 Brassica rapa FPsc
Brara.F00374 5.0kb downstream 5.0kb downstream 5000 false A06: 2174040-2179039 Brassica rapa FPsc
Brara.F00374 10.0kb upstream 10.0kb upstream 15459 true A06: 2158581-2174039 Brassica rapa FPsc
Brara.F00374 10.0kb upstream 10.0kb upstream 10000 false A06: 2158581-2168580 Brassica rapa FPsc
Brara.F00374 10.0kb downstream 10.0kb downstream 15459 true A06: 2168581-2184039 Brassica rapa FPsc
Brara.F00374 10.0kb downstream 10.0kb downstream 10000 false A06: 2174040-2184039 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505436 5273 Angiosperm Singleton cluster - no MSA
122350182 5261 Brassicaceae Singleton cluster - no MSA
123789254 5264 Brassicales-Malvales Singleton cluster - no MSA
124287257 5266 SBM Singleton cluster - no MSA
124140967 5268 Malvidae Singleton cluster - no MSA
123868098 5270 Rosid Singleton cluster - no MSA
123452851 5271 Pentapetalae Singleton cluster - no MSA
122488331 5272 Eudicot Singleton cluster - no MSA
120778645 5274 Embryophyte Singleton cluster - no MSA
122820823 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier