Gene : Brara.K00204 B. rapa FPsc v1.3
Defline:  (1 of 3) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Genomic Order:  1
Name:  ? Brara.K00204 Secondary Identifier:  ? PAC:30627424
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00204 0.5kb upstream 0.5kb upstream 3564 true Scaffold11132: 6372-9935 Brassica rapa FPsc
Brara.K00204 0.5kb upstream 0.5kb upstream 500 false Scaffold11132: 6372-6871 Brassica rapa FPsc
Brara.K00204 0.5kb downstream 0.5kb downstream 3564 true Scaffold11132: 6872-10435 Brassica rapa FPsc
Brara.K00204 0.5kb downstream 0.5kb downstream 500 false Scaffold11132: 9936-10435 Brassica rapa FPsc
Brara.K00204 1.0kb upstream 1.0kb upstream 4064 true Scaffold11132: 5872-9935 Brassica rapa FPsc
Brara.K00204 1.0kb upstream 1.0kb upstream 1000 false Scaffold11132: 5872-6871 Brassica rapa FPsc
Brara.K00204 1.0kb downstream 1.0kb downstream 4064 true Scaffold11132: 6872-10935 Brassica rapa FPsc
Brara.K00204 1.0kb downstream 1.0kb downstream 1000 false Scaffold11132: 9936-10935 Brassica rapa FPsc
Brara.K00204 2.0kb upstream 2.0kb upstream 5064 true Scaffold11132: 4872-9935 Brassica rapa FPsc
Brara.K00204 2.0kb upstream 2.0kb upstream 2000 false Scaffold11132: 4872-6871 Brassica rapa FPsc
Brara.K00204 2.0kb downstream 2.0kb downstream 5064 true Scaffold11132: 6872-11935 Brassica rapa FPsc
Brara.K00204 2.0kb downstream 2.0kb downstream 2000 false Scaffold11132: 9936-11935 Brassica rapa FPsc
Brara.K00204 5.0kb upstream 5.0kb upstream 8064 true Scaffold11132: 1872-9935 Brassica rapa FPsc
Brara.K00204 5.0kb upstream 5.0kb upstream 5000 false Scaffold11132: 1872-6871 Brassica rapa FPsc
Brara.K00204 5.0kb downstream 5.0kb downstream 8064 true Scaffold11132: 6872-14935 Brassica rapa FPsc
Brara.K00204 5.0kb downstream 5.0kb downstream 5000 false Scaffold11132: 9936-14935 Brassica rapa FPsc
Brara.K00204 10.0kb upstream 10.0kb upstream 9935 true Scaffold11132: 1-9935 Brassica rapa FPsc
Brara.K00204 10.0kb upstream 10.0kb upstream 6871 false Scaffold11132: 1-6871 Brassica rapa FPsc
Brara.K00204 10.0kb downstream 10.0kb downstream 13064 true Scaffold11132: 6872-19935 Brassica rapa FPsc
Brara.K00204 10.0kb downstream 10.0kb downstream 10000 false Scaffold11132: 9936-19935 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370515 5261 Brassicaceae View MSA
123828502 5264 Brassicales-Malvales View MSA
124338437 5266 SBM View MSA
124239100 5268 Malvidae View MSA
124063587 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier