Gene : Brara.K00626 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13832:SF362 - PROTEIN PHOSPHATASE 2C 63-RELATED Genomic Order:  6
Name:  ? Brara.K00626 Secondary Identifier:  ? PAC:30606668
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00626 0.5kb upstream 0.5kb upstream 2198 true Scaffold25010: 44889-47086 Brassica rapa FPsc
Brara.K00626 0.5kb upstream 0.5kb upstream 500 false Scaffold25010: 44889-45388 Brassica rapa FPsc
Brara.K00626 0.5kb downstream 0.5kb downstream 2198 true Scaffold25010: 45389-47586 Brassica rapa FPsc
Brara.K00626 0.5kb downstream 0.5kb downstream 500 false Scaffold25010: 47087-47586 Brassica rapa FPsc
Brara.K00626 1.0kb upstream 1.0kb upstream 2698 true Scaffold25010: 44389-47086 Brassica rapa FPsc
Brara.K00626 1.0kb upstream 1.0kb upstream 1000 false Scaffold25010: 44389-45388 Brassica rapa FPsc
Brara.K00626 1.0kb downstream 1.0kb downstream 2698 true Scaffold25010: 45389-48086 Brassica rapa FPsc
Brara.K00626 1.0kb downstream 1.0kb downstream 1000 false Scaffold25010: 47087-48086 Brassica rapa FPsc
Brara.K00626 2.0kb upstream 2.0kb upstream 3698 true Scaffold25010: 43389-47086 Brassica rapa FPsc
Brara.K00626 2.0kb upstream 2.0kb upstream 2000 false Scaffold25010: 43389-45388 Brassica rapa FPsc
Brara.K00626 2.0kb downstream 2.0kb downstream 3698 true Scaffold25010: 45389-49086 Brassica rapa FPsc
Brara.K00626 2.0kb downstream 2.0kb downstream 2000 false Scaffold25010: 47087-49086 Brassica rapa FPsc
Brara.K00626 5.0kb upstream 5.0kb upstream 6698 true Scaffold25010: 40389-47086 Brassica rapa FPsc
Brara.K00626 5.0kb upstream 5.0kb upstream 5000 false Scaffold25010: 40389-45388 Brassica rapa FPsc
Brara.K00626 5.0kb downstream 5.0kb downstream 6698 true Scaffold25010: 45389-52086 Brassica rapa FPsc
Brara.K00626 5.0kb downstream 5.0kb downstream 5000 false Scaffold25010: 47087-52086 Brassica rapa FPsc
Brara.K00626 10.0kb upstream 10.0kb upstream 11698 true Scaffold25010: 35389-47086 Brassica rapa FPsc
Brara.K00626 10.0kb upstream 10.0kb upstream 10000 false Scaffold25010: 35389-45388 Brassica rapa FPsc
Brara.K00626 10.0kb downstream 10.0kb downstream 11698 true Scaffold25010: 45389-57086 Brassica rapa FPsc
Brara.K00626 10.0kb downstream 10.0kb downstream 10000 false Scaffold25010: 47087-57086 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029851 5273 Angiosperm View MSA
122344421 5261 Brassicaceae Singleton cluster - no MSA
123784434 5264 Brassicales-Malvales Singleton cluster - no MSA
124282609 5266 SBM Singleton cluster - no MSA
124251412 5268 Malvidae View MSA
124066844 5270 Rosid View MSA
123747225 5271 Pentapetalae View MSA
122790095 5272 Eudicot View MSA
121299118 5274 Embryophyte View MSA
123337035 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier