Gene : Brara.E03232 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Genomic Order:  3232
Name:  ? Brara.E03232 Secondary Identifier:  ? PAC:30624835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6773 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03232 0.5kb upstream 0.5kb upstream 14092 true A05: 26248657-26262748 Brassica rapa FPsc
Brara.E03232 0.5kb upstream 0.5kb upstream 500 false A05: 26248657-26249156 Brassica rapa FPsc
Brara.E03232 0.5kb downstream 0.5kb downstream 14092 true A05: 26249157-26263248 Brassica rapa FPsc
Brara.E03232 0.5kb downstream 0.5kb downstream 500 false A05: 26262749-26263248 Brassica rapa FPsc
Brara.E03232 1.0kb upstream 1.0kb upstream 14592 true A05: 26248157-26262748 Brassica rapa FPsc
Brara.E03232 1.0kb upstream 1.0kb upstream 1000 false A05: 26248157-26249156 Brassica rapa FPsc
Brara.E03232 1.0kb downstream 1.0kb downstream 14592 true A05: 26249157-26263748 Brassica rapa FPsc
Brara.E03232 1.0kb downstream 1.0kb downstream 1000 false A05: 26262749-26263748 Brassica rapa FPsc
Brara.E03232 2.0kb upstream 2.0kb upstream 15592 true A05: 26247157-26262748 Brassica rapa FPsc
Brara.E03232 2.0kb upstream 2.0kb upstream 2000 false A05: 26247157-26249156 Brassica rapa FPsc
Brara.E03232 2.0kb downstream 2.0kb downstream 15592 true A05: 26249157-26264748 Brassica rapa FPsc
Brara.E03232 2.0kb downstream 2.0kb downstream 2000 false A05: 26262749-26264748 Brassica rapa FPsc
Brara.E03232 5.0kb upstream 5.0kb upstream 18592 true A05: 26244157-26262748 Brassica rapa FPsc
Brara.E03232 5.0kb upstream 5.0kb upstream 5000 false A05: 26244157-26249156 Brassica rapa FPsc
Brara.E03232 5.0kb downstream 5.0kb downstream 18592 true A05: 26249157-26267748 Brassica rapa FPsc
Brara.E03232 5.0kb downstream 5.0kb downstream 5000 false A05: 26262749-26267748 Brassica rapa FPsc
Brara.E03232 10.0kb upstream 10.0kb upstream 23592 true A05: 26239157-26262748 Brassica rapa FPsc
Brara.E03232 10.0kb upstream 10.0kb upstream 10000 false A05: 26239157-26249156 Brassica rapa FPsc
Brara.E03232 10.0kb downstream 10.0kb downstream 23592 true A05: 26249157-26272748 Brassica rapa FPsc
Brara.E03232 10.0kb downstream 10.0kb downstream 10000 false A05: 26262749-26272748 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363875 5261 Brassicaceae View MSA
123830920 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier