Gene : Brara.J02369 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11540:SF21 - MALATE DEHYDROGENASE, GLYOXYSOMAL Genomic Order:  2369
Name:  ? Brara.J02369 Secondary Identifier:  ? PAC:30611792
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLYOXYLATE-BYPASS Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02369 0.5kb upstream 0.5kb upstream 2529 true A10: 17427495-17430023 Brassica rapa FPsc
Brara.J02369 0.5kb upstream 0.5kb upstream 500 false A10: 17427495-17427994 Brassica rapa FPsc
Brara.J02369 0.5kb downstream 0.5kb downstream 2529 true A10: 17427995-17430523 Brassica rapa FPsc
Brara.J02369 0.5kb downstream 0.5kb downstream 500 false A10: 17430024-17430523 Brassica rapa FPsc
Brara.J02369 1.0kb upstream 1.0kb upstream 3029 true A10: 17426995-17430023 Brassica rapa FPsc
Brara.J02369 1.0kb upstream 1.0kb upstream 1000 false A10: 17426995-17427994 Brassica rapa FPsc
Brara.J02369 1.0kb downstream 1.0kb downstream 3029 true A10: 17427995-17431023 Brassica rapa FPsc
Brara.J02369 1.0kb downstream 1.0kb downstream 1000 false A10: 17430024-17431023 Brassica rapa FPsc
Brara.J02369 2.0kb upstream 2.0kb upstream 4029 true A10: 17425995-17430023 Brassica rapa FPsc
Brara.J02369 2.0kb upstream 2.0kb upstream 2000 false A10: 17425995-17427994 Brassica rapa FPsc
Brara.J02369 2.0kb downstream 2.0kb downstream 4029 true A10: 17427995-17432023 Brassica rapa FPsc
Brara.J02369 2.0kb downstream 2.0kb downstream 2000 false A10: 17430024-17432023 Brassica rapa FPsc
Brara.J02369 5.0kb upstream 5.0kb upstream 7029 true A10: 17422995-17430023 Brassica rapa FPsc
Brara.J02369 5.0kb upstream 5.0kb upstream 5000 false A10: 17422995-17427994 Brassica rapa FPsc
Brara.J02369 5.0kb downstream 5.0kb downstream 7029 true A10: 17427995-17435023 Brassica rapa FPsc
Brara.J02369 5.0kb downstream 5.0kb downstream 5000 false A10: 17430024-17435023 Brassica rapa FPsc
Brara.J02369 10.0kb upstream 10.0kb upstream 12029 true A10: 17417995-17430023 Brassica rapa FPsc
Brara.J02369 10.0kb upstream 10.0kb upstream 10000 false A10: 17417995-17427994 Brassica rapa FPsc
Brara.J02369 10.0kb downstream 10.0kb downstream 12029 true A10: 17427995-17440023 Brassica rapa FPsc
Brara.J02369 10.0kb downstream 10.0kb downstream 10000 false A10: 17430024-17440023 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346028 5261 Brassicaceae Singleton cluster - no MSA
123839952 5264 Brassicales-Malvales View MSA
124348581 5266 SBM View MSA
124236845 5268 Malvidae View MSA
124072228 5270 Rosid View MSA
123748567 5271 Pentapetalae View MSA
122789839 5272 Eudicot View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier