Gene : Brara.J01832 B. rapa FPsc v1.3

Defline:  (1 of 9) PF03242 - Late embryogenesis abundant protein (LEA_3) Genomic Order:  1832
Name:  ? Brara.J01832 Secondary Identifier:  ? PAC:30611925

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01832 0.5kb upstream 0.5kb upstream 4576 true A10: 14969676-14974251 Brassica rapa FPsc
Brara.J01832 0.5kb upstream 0.5kb upstream 500 false A10: 14969676-14970175 Brassica rapa FPsc
Brara.J01832 0.5kb downstream 0.5kb downstream 4576 true A10: 14970176-14974751 Brassica rapa FPsc
Brara.J01832 0.5kb downstream 0.5kb downstream 500 false A10: 14974252-14974751 Brassica rapa FPsc
Brara.J01832 1.0kb upstream 1.0kb upstream 5076 true A10: 14969176-14974251 Brassica rapa FPsc
Brara.J01832 1.0kb upstream 1.0kb upstream 1000 false A10: 14969176-14970175 Brassica rapa FPsc
Brara.J01832 1.0kb downstream 1.0kb downstream 5076 true A10: 14970176-14975251 Brassica rapa FPsc
Brara.J01832 1.0kb downstream 1.0kb downstream 1000 false A10: 14974252-14975251 Brassica rapa FPsc
Brara.J01832 2.0kb upstream 2.0kb upstream 6076 true A10: 14968176-14974251 Brassica rapa FPsc
Brara.J01832 2.0kb upstream 2.0kb upstream 2000 false A10: 14968176-14970175 Brassica rapa FPsc
Brara.J01832 2.0kb downstream 2.0kb downstream 6076 true A10: 14970176-14976251 Brassica rapa FPsc
Brara.J01832 2.0kb downstream 2.0kb downstream 2000 false A10: 14974252-14976251 Brassica rapa FPsc
Brara.J01832 5.0kb upstream 5.0kb upstream 9076 true A10: 14965176-14974251 Brassica rapa FPsc
Brara.J01832 5.0kb upstream 5.0kb upstream 5000 false A10: 14965176-14970175 Brassica rapa FPsc
Brara.J01832 5.0kb downstream 5.0kb downstream 9076 true A10: 14970176-14979251 Brassica rapa FPsc
Brara.J01832 5.0kb downstream 5.0kb downstream 5000 false A10: 14974252-14979251 Brassica rapa FPsc
Brara.J01832 10.0kb upstream 10.0kb upstream 14076 true A10: 14960176-14974251 Brassica rapa FPsc
Brara.J01832 10.0kb upstream 10.0kb upstream 10000 false A10: 14960176-14970175 Brassica rapa FPsc
Brara.J01832 10.0kb downstream 10.0kb downstream 14076 true A10: 14970176-14984251 Brassica rapa FPsc
Brara.J01832 10.0kb downstream 10.0kb downstream 10000 false A10: 14974252-14984251 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370396 5261 Brassicaceae View MSA
123841136 5264 Brassicales-Malvales View MSA
124338472 5266 SBM View MSA
124237411 5268 Malvidae View MSA
124062865 5270 Rosid View MSA
123741966 5271 Pentapetalae View MSA
122788610 5272 Eudicot View MSA
122042414 5273 Angiosperm View MSA
121309963 5274 Embryophyte View MSA
123347581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier