Gene : Brara.E02485 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR18896:SF64 - PHOSPHOLIPASE D P2 Genomic Order:  2485
Name:  ? Brara.E02485 Secondary Identifier:  ? PAC:30625559
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02485 0.5kb upstream 0.5kb upstream 8225 true A05: 22190535-22198759 Brassica rapa FPsc
Brara.E02485 0.5kb upstream 0.5kb upstream 500 false A05: 22198260-22198759 Brassica rapa FPsc
Brara.E02485 0.5kb downstream 0.5kb downstream 8225 true A05: 22190035-22198259 Brassica rapa FPsc
Brara.E02485 0.5kb downstream 0.5kb downstream 500 false A05: 22190035-22190534 Brassica rapa FPsc
Brara.E02485 1.0kb upstream 1.0kb upstream 8725 true A05: 22190535-22199259 Brassica rapa FPsc
Brara.E02485 1.0kb upstream 1.0kb upstream 1000 false A05: 22198260-22199259 Brassica rapa FPsc
Brara.E02485 1.0kb downstream 1.0kb downstream 8725 true A05: 22189535-22198259 Brassica rapa FPsc
Brara.E02485 1.0kb downstream 1.0kb downstream 1000 false A05: 22189535-22190534 Brassica rapa FPsc
Brara.E02485 2.0kb upstream 2.0kb upstream 9725 true A05: 22190535-22200259 Brassica rapa FPsc
Brara.E02485 2.0kb upstream 2.0kb upstream 2000 false A05: 22198260-22200259 Brassica rapa FPsc
Brara.E02485 2.0kb downstream 2.0kb downstream 9725 true A05: 22188535-22198259 Brassica rapa FPsc
Brara.E02485 2.0kb downstream 2.0kb downstream 2000 false A05: 22188535-22190534 Brassica rapa FPsc
Brara.E02485 5.0kb upstream 5.0kb upstream 12725 true A05: 22190535-22203259 Brassica rapa FPsc
Brara.E02485 5.0kb upstream 5.0kb upstream 5000 false A05: 22198260-22203259 Brassica rapa FPsc
Brara.E02485 5.0kb downstream 5.0kb downstream 12725 true A05: 22185535-22198259 Brassica rapa FPsc
Brara.E02485 5.0kb downstream 5.0kb downstream 5000 false A05: 22185535-22190534 Brassica rapa FPsc
Brara.E02485 10.0kb upstream 10.0kb upstream 17725 true A05: 22190535-22208259 Brassica rapa FPsc
Brara.E02485 10.0kb upstream 10.0kb upstream 10000 false A05: 22198260-22208259 Brassica rapa FPsc
Brara.E02485 10.0kb downstream 10.0kb downstream 17725 true A05: 22180535-22198259 Brassica rapa FPsc
Brara.E02485 10.0kb downstream 10.0kb downstream 10000 false A05: 22180535-22190534 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370901 5261 Brassicaceae View MSA
123827453 5264 Brassicales-Malvales View MSA
124338085 5266 SBM View MSA
124241896 5268 Malvidae View MSA
124061859 5270 Rosid View MSA
123744231 5271 Pentapetalae View MSA
122791930 5272 Eudicot View MSA
122042755 5273 Angiosperm View MSA
121345352 5274 Embryophyte View MSA
123380200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier