Gene : Brara.E02478 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  2478
Name:  ? Brara.E02478 Secondary Identifier:  ? PAC:30627293
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5143 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5885 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6803 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02478 0.5kb upstream 0.5kb upstream 3762 true A05: 22135139-22138900 Brassica rapa FPsc
Brara.E02478 0.5kb upstream 0.5kb upstream 500 false A05: 22135139-22135638 Brassica rapa FPsc
Brara.E02478 0.5kb downstream 0.5kb downstream 3762 true A05: 22135639-22139400 Brassica rapa FPsc
Brara.E02478 0.5kb downstream 0.5kb downstream 500 false A05: 22138901-22139400 Brassica rapa FPsc
Brara.E02478 1.0kb upstream 1.0kb upstream 4262 true A05: 22134639-22138900 Brassica rapa FPsc
Brara.E02478 1.0kb upstream 1.0kb upstream 1000 false A05: 22134639-22135638 Brassica rapa FPsc
Brara.E02478 1.0kb downstream 1.0kb downstream 4262 true A05: 22135639-22139900 Brassica rapa FPsc
Brara.E02478 1.0kb downstream 1.0kb downstream 1000 false A05: 22138901-22139900 Brassica rapa FPsc
Brara.E02478 2.0kb upstream 2.0kb upstream 5262 true A05: 22133639-22138900 Brassica rapa FPsc
Brara.E02478 2.0kb upstream 2.0kb upstream 2000 false A05: 22133639-22135638 Brassica rapa FPsc
Brara.E02478 2.0kb downstream 2.0kb downstream 5262 true A05: 22135639-22140900 Brassica rapa FPsc
Brara.E02478 2.0kb downstream 2.0kb downstream 2000 false A05: 22138901-22140900 Brassica rapa FPsc
Brara.E02478 5.0kb upstream 5.0kb upstream 8262 true A05: 22130639-22138900 Brassica rapa FPsc
Brara.E02478 5.0kb upstream 5.0kb upstream 5000 false A05: 22130639-22135638 Brassica rapa FPsc
Brara.E02478 5.0kb downstream 5.0kb downstream 8262 true A05: 22135639-22143900 Brassica rapa FPsc
Brara.E02478 5.0kb downstream 5.0kb downstream 5000 false A05: 22138901-22143900 Brassica rapa FPsc
Brara.E02478 10.0kb upstream 10.0kb upstream 13262 true A05: 22125639-22138900 Brassica rapa FPsc
Brara.E02478 10.0kb upstream 10.0kb upstream 10000 false A05: 22125639-22135638 Brassica rapa FPsc
Brara.E02478 10.0kb downstream 10.0kb downstream 13262 true A05: 22135639-22148900 Brassica rapa FPsc
Brara.E02478 10.0kb downstream 10.0kb downstream 10000 false A05: 22138901-22148900 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375072 5261 Brassicaceae View MSA
123831792 5264 Brassicales-Malvales View MSA
124339875 5266 SBM View MSA
124254145 5268 Malvidae View MSA
124067015 5270 Rosid View MSA
123740206 5271 Pentapetalae View MSA
122793693 5272 Eudicot View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier