Gene : Brara.B03607 B. rapa FPsc v1.3
Defline:  (1 of 4) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  3607
Name:  ? Brara.B03607 Secondary Identifier:  ? PAC:30607041
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03607 0.5kb upstream 0.5kb upstream 6166 true A02: 29871265-29877430 Brassica rapa FPsc
Brara.B03607 0.5kb upstream 0.5kb upstream 500 false A02: 29871265-29871764 Brassica rapa FPsc
Brara.B03607 0.5kb downstream 0.5kb downstream 6166 true A02: 29871765-29877930 Brassica rapa FPsc
Brara.B03607 0.5kb downstream 0.5kb downstream 500 false A02: 29877431-29877930 Brassica rapa FPsc
Brara.B03607 1.0kb upstream 1.0kb upstream 6666 true A02: 29870765-29877430 Brassica rapa FPsc
Brara.B03607 1.0kb upstream 1.0kb upstream 1000 false A02: 29870765-29871764 Brassica rapa FPsc
Brara.B03607 1.0kb downstream 1.0kb downstream 6666 true A02: 29871765-29878430 Brassica rapa FPsc
Brara.B03607 1.0kb downstream 1.0kb downstream 1000 false A02: 29877431-29878430 Brassica rapa FPsc
Brara.B03607 2.0kb upstream 2.0kb upstream 7666 true A02: 29869765-29877430 Brassica rapa FPsc
Brara.B03607 2.0kb upstream 2.0kb upstream 2000 false A02: 29869765-29871764 Brassica rapa FPsc
Brara.B03607 2.0kb downstream 2.0kb downstream 7666 true A02: 29871765-29879430 Brassica rapa FPsc
Brara.B03607 2.0kb downstream 2.0kb downstream 2000 false A02: 29877431-29879430 Brassica rapa FPsc
Brara.B03607 5.0kb upstream 5.0kb upstream 10666 true A02: 29866765-29877430 Brassica rapa FPsc
Brara.B03607 5.0kb upstream 5.0kb upstream 5000 false A02: 29866765-29871764 Brassica rapa FPsc
Brara.B03607 5.0kb downstream 5.0kb downstream 10666 true A02: 29871765-29882430 Brassica rapa FPsc
Brara.B03607 5.0kb downstream 5.0kb downstream 5000 false A02: 29877431-29882430 Brassica rapa FPsc
Brara.B03607 10.0kb upstream 10.0kb upstream 15666 true A02: 29861765-29877430 Brassica rapa FPsc
Brara.B03607 10.0kb upstream 10.0kb upstream 10000 false A02: 29861765-29871764 Brassica rapa FPsc
Brara.B03607 10.0kb downstream 10.0kb downstream 15666 true A02: 29871765-29887430 Brassica rapa FPsc
Brara.B03607 10.0kb downstream 10.0kb downstream 10000 false A02: 29877431-29887430 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792880 5273 Angiosperm View MSA
122344525 5261 Brassicaceae Singleton cluster - no MSA
123784520 5264 Brassicales-Malvales Singleton cluster - no MSA
124282692 5266 SBM Singleton cluster - no MSA
124137233 5268 Malvidae Singleton cluster - no MSA
123864975 5270 Rosid Singleton cluster - no MSA
123754759 5271 Pentapetalae View MSA
122798723 5272 Eudicot View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier