Gene : Brara.I02182 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  2182
Name:  ? Brara.I02182 Secondary Identifier:  ? PAC:30640957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02182 0.5kb upstream 0.5kb upstream 1653 true A09: 16513514-16515166 Brassica rapa FPsc
Brara.I02182 0.5kb upstream 0.5kb upstream 500 false A09: 16514667-16515166 Brassica rapa FPsc
Brara.I02182 0.5kb downstream 0.5kb downstream 1653 true A09: 16513014-16514666 Brassica rapa FPsc
Brara.I02182 0.5kb downstream 0.5kb downstream 500 false A09: 16513014-16513513 Brassica rapa FPsc
Brara.I02182 1.0kb upstream 1.0kb upstream 2153 true A09: 16513514-16515666 Brassica rapa FPsc
Brara.I02182 1.0kb upstream 1.0kb upstream 1000 false A09: 16514667-16515666 Brassica rapa FPsc
Brara.I02182 1.0kb downstream 1.0kb downstream 2153 true A09: 16512514-16514666 Brassica rapa FPsc
Brara.I02182 1.0kb downstream 1.0kb downstream 1000 false A09: 16512514-16513513 Brassica rapa FPsc
Brara.I02182 2.0kb upstream 2.0kb upstream 3153 true A09: 16513514-16516666 Brassica rapa FPsc
Brara.I02182 2.0kb upstream 2.0kb upstream 2000 false A09: 16514667-16516666 Brassica rapa FPsc
Brara.I02182 2.0kb downstream 2.0kb downstream 3153 true A09: 16511514-16514666 Brassica rapa FPsc
Brara.I02182 2.0kb downstream 2.0kb downstream 2000 false A09: 16511514-16513513 Brassica rapa FPsc
Brara.I02182 5.0kb upstream 5.0kb upstream 6153 true A09: 16513514-16519666 Brassica rapa FPsc
Brara.I02182 5.0kb upstream 5.0kb upstream 5000 false A09: 16514667-16519666 Brassica rapa FPsc
Brara.I02182 5.0kb downstream 5.0kb downstream 6153 true A09: 16508514-16514666 Brassica rapa FPsc
Brara.I02182 5.0kb downstream 5.0kb downstream 5000 false A09: 16508514-16513513 Brassica rapa FPsc
Brara.I02182 10.0kb upstream 10.0kb upstream 11153 true A09: 16513514-16524666 Brassica rapa FPsc
Brara.I02182 10.0kb upstream 10.0kb upstream 10000 false A09: 16514667-16524666 Brassica rapa FPsc
Brara.I02182 10.0kb downstream 10.0kb downstream 11153 true A09: 16503514-16514666 Brassica rapa FPsc
Brara.I02182 10.0kb downstream 10.0kb downstream 10000 false A09: 16503514-16513513 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365479 5261 Brassicaceae View MSA
123838462 5264 Brassicales-Malvales View MSA
124341330 5266 SBM View MSA
124244249 5268 Malvidae View MSA
124064645 5270 Rosid View MSA
123751452 5271 Pentapetalae View MSA
122791006 5272 Eudicot View MSA
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier