Gene : Brara.H02952 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31407:SF6 - OXYGEN-EVOLVING ENHANCER PROTEIN 2-1, CHLOROPLASTIC-RELATED Genomic Order:  2952
Name:  ? Brara.H02952 Secondary Identifier:  ? PAC:30649348
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02952 0.5kb upstream 0.5kb upstream 1951 true A08: 22485549-22487499 Brassica rapa FPsc
Brara.H02952 0.5kb upstream 0.5kb upstream 500 false A08: 22487000-22487499 Brassica rapa FPsc
Brara.H02952 0.5kb downstream 0.5kb downstream 1951 true A08: 22485049-22486999 Brassica rapa FPsc
Brara.H02952 0.5kb downstream 0.5kb downstream 500 false A08: 22485049-22485548 Brassica rapa FPsc
Brara.H02952 1.0kb upstream 1.0kb upstream 2451 true A08: 22485549-22487999 Brassica rapa FPsc
Brara.H02952 1.0kb upstream 1.0kb upstream 1000 false A08: 22487000-22487999 Brassica rapa FPsc
Brara.H02952 1.0kb downstream 1.0kb downstream 2451 true A08: 22484549-22486999 Brassica rapa FPsc
Brara.H02952 1.0kb downstream 1.0kb downstream 1000 false A08: 22484549-22485548 Brassica rapa FPsc
Brara.H02952 2.0kb upstream 2.0kb upstream 3451 true A08: 22485549-22488999 Brassica rapa FPsc
Brara.H02952 2.0kb upstream 2.0kb upstream 2000 false A08: 22487000-22488999 Brassica rapa FPsc
Brara.H02952 2.0kb downstream 2.0kb downstream 3451 true A08: 22483549-22486999 Brassica rapa FPsc
Brara.H02952 2.0kb downstream 2.0kb downstream 2000 false A08: 22483549-22485548 Brassica rapa FPsc
Brara.H02952 5.0kb upstream 5.0kb upstream 6451 true A08: 22485549-22491999 Brassica rapa FPsc
Brara.H02952 5.0kb upstream 5.0kb upstream 5000 false A08: 22487000-22491999 Brassica rapa FPsc
Brara.H02952 5.0kb downstream 5.0kb downstream 6451 true A08: 22480549-22486999 Brassica rapa FPsc
Brara.H02952 5.0kb downstream 5.0kb downstream 5000 false A08: 22480549-22485548 Brassica rapa FPsc
Brara.H02952 10.0kb upstream 10.0kb upstream 11451 true A08: 22485549-22496999 Brassica rapa FPsc
Brara.H02952 10.0kb upstream 10.0kb upstream 10000 false A08: 22487000-22496999 Brassica rapa FPsc
Brara.H02952 10.0kb downstream 10.0kb downstream 11451 true A08: 22475549-22486999 Brassica rapa FPsc
Brara.H02952 10.0kb downstream 10.0kb downstream 10000 false A08: 22475549-22485548 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355492 5261 Brassicaceae Singleton cluster - no MSA
123793730 5264 Brassicales-Malvales Singleton cluster - no MSA
124291560 5266 SBM Singleton cluster - no MSA
124144490 5268 Malvidae Singleton cluster - no MSA
123871033 5270 Rosid Singleton cluster - no MSA
123746679 5271 Pentapetalae View MSA
122793257 5272 Eudicot View MSA
122047548 5273 Angiosperm View MSA
121349110 5274 Embryophyte View MSA
123424877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier