Gene : Brara.H00143 B. rapa FPsc v1.3
Defline:  (1 of 12) 1.1.1.37 - Malate dehydrogenase / Malic dehydrogenase Genomic Order:  143
Name:  ? Brara.H00143 Secondary Identifier:  ? PAC:30648980
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLYOXYLATE-BYPASS Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00143 0.5kb upstream 0.5kb upstream 2553 true A08: 1191314-1193866 Brassica rapa FPsc
Brara.H00143 0.5kb upstream 0.5kb upstream 500 false A08: 1191314-1191813 Brassica rapa FPsc
Brara.H00143 0.5kb downstream 0.5kb downstream 2553 true A08: 1191814-1194366 Brassica rapa FPsc
Brara.H00143 0.5kb downstream 0.5kb downstream 500 false A08: 1193867-1194366 Brassica rapa FPsc
Brara.H00143 1.0kb upstream 1.0kb upstream 3053 true A08: 1190814-1193866 Brassica rapa FPsc
Brara.H00143 1.0kb upstream 1.0kb upstream 1000 false A08: 1190814-1191813 Brassica rapa FPsc
Brara.H00143 1.0kb downstream 1.0kb downstream 3053 true A08: 1191814-1194866 Brassica rapa FPsc
Brara.H00143 1.0kb downstream 1.0kb downstream 1000 false A08: 1193867-1194866 Brassica rapa FPsc
Brara.H00143 2.0kb upstream 2.0kb upstream 4053 true A08: 1189814-1193866 Brassica rapa FPsc
Brara.H00143 2.0kb upstream 2.0kb upstream 2000 false A08: 1189814-1191813 Brassica rapa FPsc
Brara.H00143 2.0kb downstream 2.0kb downstream 4053 true A08: 1191814-1195866 Brassica rapa FPsc
Brara.H00143 2.0kb downstream 2.0kb downstream 2000 false A08: 1193867-1195866 Brassica rapa FPsc
Brara.H00143 5.0kb upstream 5.0kb upstream 7053 true A08: 1186814-1193866 Brassica rapa FPsc
Brara.H00143 5.0kb upstream 5.0kb upstream 5000 false A08: 1186814-1191813 Brassica rapa FPsc
Brara.H00143 5.0kb downstream 5.0kb downstream 7053 true A08: 1191814-1198866 Brassica rapa FPsc
Brara.H00143 5.0kb downstream 5.0kb downstream 5000 false A08: 1193867-1198866 Brassica rapa FPsc
Brara.H00143 10.0kb upstream 10.0kb upstream 12053 true A08: 1181814-1193866 Brassica rapa FPsc
Brara.H00143 10.0kb upstream 10.0kb upstream 10000 false A08: 1181814-1191813 Brassica rapa FPsc
Brara.H00143 10.0kb downstream 10.0kb downstream 12053 true A08: 1191814-1203866 Brassica rapa FPsc
Brara.H00143 10.0kb downstream 10.0kb downstream 10000 false A08: 1193867-1203866 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375905 5261 Brassicaceae View MSA
123840380 5264 Brassicales-Malvales View MSA
124342947 5266 SBM View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier