Gene : Brara.G02541 B. rapa FPsc v1.3
Defline:  (1 of 8) 2.7.8.11 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase Genomic Order:  2541
Name:  ? Brara.G02541 Secondary Identifier:  ? PAC:30635952
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7625 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02541 0.5kb upstream 0.5kb upstream 2825 true A07: 21095034-21097858 Brassica rapa FPsc
Brara.G02541 0.5kb upstream 0.5kb upstream 500 false A07: 21097359-21097858 Brassica rapa FPsc
Brara.G02541 0.5kb downstream 0.5kb downstream 2825 true A07: 21094534-21097358 Brassica rapa FPsc
Brara.G02541 0.5kb downstream 0.5kb downstream 500 false A07: 21094534-21095033 Brassica rapa FPsc
Brara.G02541 1.0kb upstream 1.0kb upstream 3325 true A07: 21095034-21098358 Brassica rapa FPsc
Brara.G02541 1.0kb upstream 1.0kb upstream 1000 false A07: 21097359-21098358 Brassica rapa FPsc
Brara.G02541 1.0kb downstream 1.0kb downstream 3325 true A07: 21094034-21097358 Brassica rapa FPsc
Brara.G02541 1.0kb downstream 1.0kb downstream 1000 false A07: 21094034-21095033 Brassica rapa FPsc
Brara.G02541 2.0kb upstream 2.0kb upstream 4325 true A07: 21095034-21099358 Brassica rapa FPsc
Brara.G02541 2.0kb upstream 2.0kb upstream 2000 false A07: 21097359-21099358 Brassica rapa FPsc
Brara.G02541 2.0kb downstream 2.0kb downstream 4325 true A07: 21093034-21097358 Brassica rapa FPsc
Brara.G02541 2.0kb downstream 2.0kb downstream 2000 false A07: 21093034-21095033 Brassica rapa FPsc
Brara.G02541 5.0kb upstream 5.0kb upstream 7325 true A07: 21095034-21102358 Brassica rapa FPsc
Brara.G02541 5.0kb upstream 5.0kb upstream 5000 false A07: 21097359-21102358 Brassica rapa FPsc
Brara.G02541 5.0kb downstream 5.0kb downstream 7325 true A07: 21090034-21097358 Brassica rapa FPsc
Brara.G02541 5.0kb downstream 5.0kb downstream 5000 false A07: 21090034-21095033 Brassica rapa FPsc
Brara.G02541 10.0kb upstream 10.0kb upstream 12325 true A07: 21095034-21107358 Brassica rapa FPsc
Brara.G02541 10.0kb upstream 10.0kb upstream 10000 false A07: 21097359-21107358 Brassica rapa FPsc
Brara.G02541 10.0kb downstream 10.0kb downstream 12325 true A07: 21085034-21097358 Brassica rapa FPsc
Brara.G02541 10.0kb downstream 10.0kb downstream 10000 false A07: 21085034-21095033 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352051 5261 Brassicaceae Singleton cluster - no MSA
123790836 5264 Brassicales-Malvales Singleton cluster - no MSA
124288771 5266 SBM Singleton cluster - no MSA
124142228 5268 Malvidae Singleton cluster - no MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier