Gene : Brara.F03778 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.1.1.284 - S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase Genomic Order:  3778
Name:  ? Brara.F03778 Secondary Identifier:  ? PAC:30627881
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1801 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5486 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5751 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6333 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6802 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03778 0.5kb upstream 0.5kb upstream 2947 true A06: 28528735-28531681 Brassica rapa FPsc
Brara.F03778 0.5kb upstream 0.5kb upstream 500 false A06: 28531182-28531681 Brassica rapa FPsc
Brara.F03778 0.5kb downstream 0.5kb downstream 2947 true A06: 28528235-28531181 Brassica rapa FPsc
Brara.F03778 0.5kb downstream 0.5kb downstream 500 false A06: 28528235-28528734 Brassica rapa FPsc
Brara.F03778 1.0kb upstream 1.0kb upstream 3447 true A06: 28528735-28532181 Brassica rapa FPsc
Brara.F03778 1.0kb upstream 1.0kb upstream 1000 false A06: 28531182-28532181 Brassica rapa FPsc
Brara.F03778 1.0kb downstream 1.0kb downstream 3447 true A06: 28527735-28531181 Brassica rapa FPsc
Brara.F03778 1.0kb downstream 1.0kb downstream 1000 false A06: 28527735-28528734 Brassica rapa FPsc
Brara.F03778 2.0kb upstream 2.0kb upstream 4447 true A06: 28528735-28533181 Brassica rapa FPsc
Brara.F03778 2.0kb upstream 2.0kb upstream 2000 false A06: 28531182-28533181 Brassica rapa FPsc
Brara.F03778 2.0kb downstream 2.0kb downstream 4447 true A06: 28526735-28531181 Brassica rapa FPsc
Brara.F03778 2.0kb downstream 2.0kb downstream 2000 false A06: 28526735-28528734 Brassica rapa FPsc
Brara.F03778 5.0kb upstream 5.0kb upstream 7447 true A06: 28528735-28536181 Brassica rapa FPsc
Brara.F03778 5.0kb upstream 5.0kb upstream 5000 false A06: 28531182-28536181 Brassica rapa FPsc
Brara.F03778 5.0kb downstream 5.0kb downstream 7447 true A06: 28523735-28531181 Brassica rapa FPsc
Brara.F03778 5.0kb downstream 5.0kb downstream 5000 false A06: 28523735-28528734 Brassica rapa FPsc
Brara.F03778 10.0kb upstream 10.0kb upstream 12447 true A06: 28528735-28541181 Brassica rapa FPsc
Brara.F03778 10.0kb upstream 10.0kb upstream 10000 false A06: 28531182-28541181 Brassica rapa FPsc
Brara.F03778 10.0kb downstream 10.0kb downstream 12447 true A06: 28518735-28531181 Brassica rapa FPsc
Brara.F03778 10.0kb downstream 10.0kb downstream 10000 false A06: 28518735-28528734 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367475 5261 Brassicaceae View MSA
123831887 5264 Brassicales-Malvales View MSA
124337937 5266 SBM View MSA
124251337 5268 Malvidae View MSA
124074048 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier