Gene : Brara.D00995 B. rapa FPsc v1.3
Defline:  (1 of 24) PTHR11802:SF29 - SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED Genomic Order:  995
Name:  ? Brara.D00995 Secondary Identifier:  ? PAC:30621277
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3301 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00995 0.5kb upstream 0.5kb upstream 2952 true A04: 9387895-9390846 Brassica rapa FPsc
Brara.D00995 0.5kb upstream 0.5kb upstream 500 false A04: 9387895-9388394 Brassica rapa FPsc
Brara.D00995 0.5kb downstream 0.5kb downstream 2952 true A04: 9388395-9391346 Brassica rapa FPsc
Brara.D00995 0.5kb downstream 0.5kb downstream 500 false A04: 9390847-9391346 Brassica rapa FPsc
Brara.D00995 1.0kb upstream 1.0kb upstream 3452 true A04: 9387395-9390846 Brassica rapa FPsc
Brara.D00995 1.0kb upstream 1.0kb upstream 1000 false A04: 9387395-9388394 Brassica rapa FPsc
Brara.D00995 1.0kb downstream 1.0kb downstream 3452 true A04: 9388395-9391846 Brassica rapa FPsc
Brara.D00995 1.0kb downstream 1.0kb downstream 1000 false A04: 9390847-9391846 Brassica rapa FPsc
Brara.D00995 2.0kb upstream 2.0kb upstream 4452 true A04: 9386395-9390846 Brassica rapa FPsc
Brara.D00995 2.0kb upstream 2.0kb upstream 2000 false A04: 9386395-9388394 Brassica rapa FPsc
Brara.D00995 2.0kb downstream 2.0kb downstream 4452 true A04: 9388395-9392846 Brassica rapa FPsc
Brara.D00995 2.0kb downstream 2.0kb downstream 2000 false A04: 9390847-9392846 Brassica rapa FPsc
Brara.D00995 5.0kb upstream 5.0kb upstream 7452 true A04: 9383395-9390846 Brassica rapa FPsc
Brara.D00995 5.0kb upstream 5.0kb upstream 5000 false A04: 9383395-9388394 Brassica rapa FPsc
Brara.D00995 5.0kb downstream 5.0kb downstream 7452 true A04: 9388395-9395846 Brassica rapa FPsc
Brara.D00995 5.0kb downstream 5.0kb downstream 5000 false A04: 9390847-9395846 Brassica rapa FPsc
Brara.D00995 10.0kb upstream 10.0kb upstream 12452 true A04: 9378395-9390846 Brassica rapa FPsc
Brara.D00995 10.0kb upstream 10.0kb upstream 10000 false A04: 9378395-9388394 Brassica rapa FPsc
Brara.D00995 10.0kb downstream 10.0kb downstream 12452 true A04: 9388395-9400846 Brassica rapa FPsc
Brara.D00995 10.0kb downstream 10.0kb downstream 10000 false A04: 9390847-9400846 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378201 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier