Protein Domain : IPR014736

Type:  Domain Name:  Transposase, Tn5-like, core
Description:  This domain forms the central core of Tn5-type transposase proteins. Prokaryotic Tn5 transposase makes two types of DNA contacts (cis-contacts for DNA recognition and trans-contacts for catalysis) as well as protein-protein contacts []. Tn5 transposase employs two cations at its active site during catalysis, which cause conformational changes in the bound DNA and which are required for transposition []. Tn5 transposase has a RnaseH-type alpha/beta/alpha fold. The central core domain has an alpha/beta complex structure. Short Name:  Transposase_Tn5-like_core
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0 Child Features

1 Contains

DB identifier Type Name
IPR002559 Domain Transposase, IS4-like

1 Cross References

Identifier
G3DSA:3.90.350.10

1 Found In

DB identifier Type Name
IPR012337 Domain Ribonuclease H-like domain

0 GO Annotation

0 Ontology Annotations

0 Parent Features

22 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29264.m000024 B9TCF5 PAC:16802572 Ricinus communis 379  
Traes_7BS_9F5A66A59.1 PAC:31954219 Triticum aestivum 273  
Brdisv1RON21039100m.p PAC:34775672 Brachypodium distachyon Ron2 180  
AUR62009642-RA PAC:36321714 Chenopodium quinoa 134  
VIT_200s2787g00005.1 PAC:38049369 Vitis vinifera 402  
Gohir.A06G043100.1.p PAC:38126978 Gossypium hirsutum 223  
Gohir.1Z059500.1.p PAC:38097216 Gossypium hirsutum 252  
Isati.0358s0037.1.p PAC:39367947 Isatis tinctoria 155  
Sialb.0463s0011.1.p PAC:39573802 Sinapis alba 102  
Gomus.D11G133800.1.p A0A5D2SRN9 PAC:42048101 Gossypium mustelinum 190  
Gotom.A06G051300.1.p A0A5D2PZL1 PAC:42241910 Gossypium tomentosum 223  
Gotom.A06G051300.2.p A0A5D2Q0C9 PAC:42241911 Gossypium tomentosum 159  
Gobar.A06G049200.1.p A0A5J5V9I1 PAC:42275649 Gossypium barbadense 223  
Gohir.A06G043100.1.p PAC:42409601 Gossypium hirsutum 223  
Godar.A06G052500.1.p A0A5D2G281 PAC:42571196 Gossypium darwinii 223  
Godar.D07G236100.1.p A0A5D2C1K3 PAC:42521305 Gossypium darwinii 252  
CKAN_01486300 A0A3S3N5W7 PAC:42699295 Cinnamomum kanehirae 719  
CKAN_00289600 A0A443N7S9 PAC:42701356 Cinnamomum kanehirae 607  
CepurR40.12G143700.1.p PAC:43014078 Ceratodon purpureus R40 722  
CepurR40.12G143700.2.p PAC:43014079 Ceratodon purpureus R40 722  
CepurGG1.12G147200.1.p PAC:43054403 Ceratodon purpureus GG1 676  
SpUn0316_0030.1 PAC:45100510 Schrenkiella parvula 263  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11896402
            15102449