Gene : Sevir.2G412900 S. viridis v2.1
Defline:  (1 of 1) PTHR11540//PTHR11540:SF25 - MALATE AND LACTATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  4497
Name:  ? Sevir.2G412900 Secondary Identifier:  ? PAC:40623569
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLUCONEO-PWY Setaria viridis pathologic  
Sviridis GLYOXYLATE-BYPASS Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-5690 Setaria viridis pathologic  
Sviridis PWY-7115 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G412900 0.5kb upstream 0.5kb upstream 3018 true Chr_02: 45100948-45103965 Setaria viridis
Sevir.2G412900 0.5kb upstream 0.5kb upstream 500 false Chr_02: 45103466-45103965 Setaria viridis
Sevir.2G412900 0.5kb downstream 0.5kb downstream 3018 true Chr_02: 45100448-45103465 Setaria viridis
Sevir.2G412900 0.5kb downstream 0.5kb downstream 500 false Chr_02: 45100448-45100947 Setaria viridis
Sevir.2G412900 1.0kb upstream 1.0kb upstream 3518 true Chr_02: 45100948-45104465 Setaria viridis
Sevir.2G412900 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 45103466-45104465 Setaria viridis
Sevir.2G412900 1.0kb downstream 1.0kb downstream 3518 true Chr_02: 45099948-45103465 Setaria viridis
Sevir.2G412900 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 45099948-45100947 Setaria viridis
Sevir.2G412900 2.0kb upstream 2.0kb upstream 4518 true Chr_02: 45100948-45105465 Setaria viridis
Sevir.2G412900 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 45103466-45105465 Setaria viridis
Sevir.2G412900 2.0kb downstream 2.0kb downstream 4518 true Chr_02: 45098948-45103465 Setaria viridis
Sevir.2G412900 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 45098948-45100947 Setaria viridis
Sevir.2G412900 5.0kb upstream 5.0kb upstream 7518 true Chr_02: 45100948-45108465 Setaria viridis
Sevir.2G412900 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 45103466-45108465 Setaria viridis
Sevir.2G412900 5.0kb downstream 5.0kb downstream 7518 true Chr_02: 45095948-45103465 Setaria viridis
Sevir.2G412900 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 45095948-45100947 Setaria viridis
Sevir.2G412900 10.0kb upstream 10.0kb upstream 12518 true Chr_02: 45100948-45113465 Setaria viridis
Sevir.2G412900 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 45103466-45113465 Setaria viridis
Sevir.2G412900 10.0kb downstream 10.0kb downstream 12518 true Chr_02: 45090948-45103465 Setaria viridis
Sevir.2G412900 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 45090948-45100947 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993545 5273 Angiosperm View MSA
122186213 5267 Panicoideae View MSA
124579472 5269 Grass View MSA
121263817 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain