Gene : Glyma.U041900 G. max Wm82.a2.v1
Defline:  (1 of 21) PTHR34053:SF1 - PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  2
Name:  ? Glyma.U041900 Secondary Identifier:  ? PAC:30523483
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U041900 0.5kb upstream 0.5kb upstream 2205 true scaffold_691: 1474-3678 Glycine max
Glyma.U041900 0.5kb upstream 0.5kb upstream 500 false scaffold_691: 1474-1973 Glycine max
Glyma.U041900 0.5kb downstream 0.5kb downstream 2205 true scaffold_691: 1974-4178 Glycine max
Glyma.U041900 0.5kb downstream 0.5kb downstream 500 false scaffold_691: 3679-4178 Glycine max
Glyma.U041900 1.0kb upstream 1.0kb upstream 2705 true scaffold_691: 974-3678 Glycine max
Glyma.U041900 1.0kb upstream 1.0kb upstream 1000 false scaffold_691: 974-1973 Glycine max
Glyma.U041900 1.0kb downstream 1.0kb downstream 2705 true scaffold_691: 1974-4678 Glycine max
Glyma.U041900 1.0kb downstream 1.0kb downstream 1000 false scaffold_691: 3679-4678 Glycine max
Glyma.U041900 2.0kb upstream 2.0kb upstream 3678 true scaffold_691: 1-3678 Glycine max
Glyma.U041900 2.0kb upstream 2.0kb upstream 1973 false scaffold_691: 1-1973 Glycine max
Glyma.U041900 2.0kb downstream 2.0kb downstream 3705 true scaffold_691: 1974-5678 Glycine max
Glyma.U041900 2.0kb downstream 2.0kb downstream 2000 false scaffold_691: 3679-5678 Glycine max
Glyma.U041900 5.0kb upstream 5.0kb upstream 3678 true scaffold_691: 1-3678 Glycine max
Glyma.U041900 5.0kb upstream 5.0kb upstream 1973 false scaffold_691: 1-1973 Glycine max
Glyma.U041900 5.0kb downstream 5.0kb downstream 5340 true scaffold_691: 1974-7313 Glycine max
Glyma.U041900 5.0kb downstream 5.0kb downstream 3635 false scaffold_691: 3679-7313 Glycine max
Glyma.U041900 10.0kb upstream 10.0kb upstream 3678 true scaffold_691: 1-3678 Glycine max
Glyma.U041900 10.0kb upstream 10.0kb upstream 1973 false scaffold_691: 1-1973 Glycine max
Glyma.U041900 10.0kb downstream 10.0kb downstream 5340 true scaffold_691: 1974-7313 Glycine max
Glyma.U041900 10.0kb downstream 10.0kb downstream 3635 false scaffold_691: 3679-7313 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030367 5273 Angiosperm View MSA
122250281 5265 Fabidae View MSA
123993534 5270 Rosid View MSA
123754416 5271 Pentapetalae View MSA
122775796 5272 Eudicot View MSA
121299548 5274 Embryophyte View MSA
123337406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.141645 0.0 0.583743 Low Low
cufflinks 0.332657 0.0 2.12307    
cufflinks 0.581892 0.0 3.05011    
cufflinks 1.01162 0.0 5.01167   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.278891 0.0 1.39467    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.922       High
cufflinks 0.346       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  

0 Strain