Gene : Glyma.U018600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  95
Name:  ? Glyma.U018600 Secondary Identifier:  ? PAC:30535302
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U018600 0.5kb upstream 0.5kb upstream 2484 true scaffold_21: 3147943-3150426 Glycine max
Glyma.U018600 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3147943-3148442 Glycine max
Glyma.U018600 0.5kb downstream 0.5kb downstream 2484 true scaffold_21: 3148443-3150926 Glycine max
Glyma.U018600 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3150427-3150926 Glycine max
Glyma.U018600 1.0kb upstream 1.0kb upstream 2984 true scaffold_21: 3147443-3150426 Glycine max
Glyma.U018600 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3147443-3148442 Glycine max
Glyma.U018600 1.0kb downstream 1.0kb downstream 2984 true scaffold_21: 3148443-3151426 Glycine max
Glyma.U018600 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3150427-3151426 Glycine max
Glyma.U018600 2.0kb upstream 2.0kb upstream 3984 true scaffold_21: 3146443-3150426 Glycine max
Glyma.U018600 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3146443-3148442 Glycine max
Glyma.U018600 2.0kb downstream 2.0kb downstream 3984 true scaffold_21: 3148443-3152426 Glycine max
Glyma.U018600 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3150427-3152426 Glycine max
Glyma.U018600 5.0kb upstream 5.0kb upstream 6984 true scaffold_21: 3143443-3150426 Glycine max
Glyma.U018600 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3143443-3148442 Glycine max
Glyma.U018600 5.0kb downstream 5.0kb downstream 6984 true scaffold_21: 3148443-3155426 Glycine max
Glyma.U018600 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3150427-3155426 Glycine max
Glyma.U018600 10.0kb upstream 10.0kb upstream 11984 true scaffold_21: 3138443-3150426 Glycine max
Glyma.U018600 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3138443-3148442 Glycine max
Glyma.U018600 10.0kb downstream 10.0kb downstream 11984 true scaffold_21: 3148443-3160426 Glycine max
Glyma.U018600 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3150427-3160426 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306358 5265 Fabidae View MSA
124070072 5270 Rosid View MSA
123749570 5271 Pentapetalae View MSA
122773209 5272 Eudicot View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28257 0.0 13.2298    
cufflinks 0.912059 0.0 4.09578   Low
cufflinks 4.22421 0.0 20.0302    
cufflinks 1.33827 0.0 5.70201   Low
cufflinks 5.65953 0.0 26.9097    
cufflinks 12.654 0.0 50.6838   High
cufflinks 2.70911 0.0 12.4922    
cufflinks 10.1327 0.0 41.8678    
cufflinks 20.9187 0.0 81.2038 High High
cufflinks 0.704        
cufflinks 1.718        
cufflinks 0.865        
cufflinks 0.406        
cufflinks 0.194        
cufflinks 3.982       High
cufflinks 0.041     Low Low
cufflinks 1.886       High
cufflinks 0.402        
cufflinks 0.187        
cufflinks 0.067     Low Low
cufflinks 1.886       High
cufflinks 0.069     Low Low
cufflinks 0.016     Low Low
cufflinks 2.029       High
cufflinks 0.101        
cufflinks 0.912        

0 Strain