Gene : Glyma.U018000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN Genomic Order:  89
Name:  ? Glyma.U018000 Secondary Identifier:  ? PAC:30535421
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U018000 0.5kb upstream 0.5kb upstream 7344 true scaffold_21: 3029967-3037310 Glycine max
Glyma.U018000 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3036811-3037310 Glycine max
Glyma.U018000 0.5kb downstream 0.5kb downstream 7344 true scaffold_21: 3029467-3036810 Glycine max
Glyma.U018000 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3029467-3029966 Glycine max
Glyma.U018000 1.0kb upstream 1.0kb upstream 7844 true scaffold_21: 3029967-3037810 Glycine max
Glyma.U018000 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3036811-3037810 Glycine max
Glyma.U018000 1.0kb downstream 1.0kb downstream 7844 true scaffold_21: 3028967-3036810 Glycine max
Glyma.U018000 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3028967-3029966 Glycine max
Glyma.U018000 2.0kb upstream 2.0kb upstream 8844 true scaffold_21: 3029967-3038810 Glycine max
Glyma.U018000 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3036811-3038810 Glycine max
Glyma.U018000 2.0kb downstream 2.0kb downstream 8844 true scaffold_21: 3027967-3036810 Glycine max
Glyma.U018000 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3027967-3029966 Glycine max
Glyma.U018000 5.0kb upstream 5.0kb upstream 11844 true scaffold_21: 3029967-3041810 Glycine max
Glyma.U018000 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3036811-3041810 Glycine max
Glyma.U018000 5.0kb downstream 5.0kb downstream 11844 true scaffold_21: 3024967-3036810 Glycine max
Glyma.U018000 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3024967-3029966 Glycine max
Glyma.U018000 10.0kb upstream 10.0kb upstream 16844 true scaffold_21: 3029967-3046810 Glycine max
Glyma.U018000 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3036811-3046810 Glycine max
Glyma.U018000 10.0kb downstream 10.0kb downstream 16844 true scaffold_21: 3019967-3036810 Glycine max
Glyma.U018000 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3019967-3029966 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305207 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0470077 0.0 0.194932 Low  
cufflinks 0.0201299 0.0 0.0891011 Low  
cufflinks 1.24308 0.0 4.41103    
cufflinks 0.0138046 0.0 0.0634206 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.3156 0.0 33.5936   High
cufflinks 0.0159646 0.0 0.0722551 Low  
cufflinks 0.0161991 0.0 0.0732684 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.016     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.014     Low  
cufflinks 0.003     Low  
cufflinks 0.019     Low High
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low

0 Strain