Gene : Glyma.U031300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  28
Name:  ? Glyma.U031300 Secondary Identifier:  ? PAC:30523556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U031300 0.5kb upstream 0.5kb upstream 6559 true scaffold_28: 342954-349512 Glycine max
Glyma.U031300 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 349013-349512 Glycine max
Glyma.U031300 0.5kb downstream 0.5kb downstream 6559 true scaffold_28: 342454-349012 Glycine max
Glyma.U031300 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 342454-342953 Glycine max
Glyma.U031300 1.0kb upstream 1.0kb upstream 7059 true scaffold_28: 342954-350012 Glycine max
Glyma.U031300 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 349013-350012 Glycine max
Glyma.U031300 1.0kb downstream 1.0kb downstream 7059 true scaffold_28: 341954-349012 Glycine max
Glyma.U031300 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 341954-342953 Glycine max
Glyma.U031300 2.0kb upstream 2.0kb upstream 8059 true scaffold_28: 342954-351012 Glycine max
Glyma.U031300 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 349013-351012 Glycine max
Glyma.U031300 2.0kb downstream 2.0kb downstream 8059 true scaffold_28: 340954-349012 Glycine max
Glyma.U031300 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 340954-342953 Glycine max
Glyma.U031300 5.0kb upstream 5.0kb upstream 11059 true scaffold_28: 342954-354012 Glycine max
Glyma.U031300 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 349013-354012 Glycine max
Glyma.U031300 5.0kb downstream 5.0kb downstream 11059 true scaffold_28: 337954-349012 Glycine max
Glyma.U031300 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 337954-342953 Glycine max
Glyma.U031300 10.0kb upstream 10.0kb upstream 16059 true scaffold_28: 342954-359012 Glycine max
Glyma.U031300 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 349013-359012 Glycine max
Glyma.U031300 10.0kb downstream 10.0kb downstream 16059 true scaffold_28: 332954-349012 Glycine max
Glyma.U031300 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 332954-342953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310652 5265 Fabidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.25415 0.0 37.7896    
cufflinks 5.7815 0.0 25.8785    
cufflinks 11.1708 0.0 49.272    
cufflinks 8.42834 0.0 38.5395    
cufflinks 7.03222 0.0 26.5128    
cufflinks 4.7804 0.0 20.0368   Low
cufflinks 21.995 0.0 84.8209 High High
cufflinks 5.75659 0.0 25.712    
cufflinks 5.63394 0.0 25.3319    
cufflinks 0.366        
cufflinks 0.311        
cufflinks 0.642       High
cufflinks 0.423        
cufflinks 0.381        
cufflinks 0.379        
cufflinks 0.318        
cufflinks 0.288        
cufflinks 0.553       High
cufflinks 0.495       High
cufflinks 0.342        
cufflinks 0.317        
cufflinks 0.374        
cufflinks 0.355        
cufflinks 0.306        
cufflinks 0.313        
cufflinks 0.245       Low

0 Strain