Gene : Glyma.20G236900 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG4431 - Uncharacterized protein, induced by hypoxia Genomic Order:  2369
Name:  ? Glyma.20G236900 Secondary Identifier:  ? PAC:30521778
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G236900 0.5kb upstream 0.5kb upstream 3156 true Chr20: 46904795-46907950 Glycine max
Glyma.20G236900 0.5kb upstream 0.5kb upstream 500 false Chr20: 46904795-46905294 Glycine max
Glyma.20G236900 0.5kb downstream 0.5kb downstream 3156 true Chr20: 46905295-46908450 Glycine max
Glyma.20G236900 0.5kb downstream 0.5kb downstream 500 false Chr20: 46907951-46908450 Glycine max
Glyma.20G236900 1.0kb upstream 1.0kb upstream 3656 true Chr20: 46904295-46907950 Glycine max
Glyma.20G236900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46904295-46905294 Glycine max
Glyma.20G236900 1.0kb downstream 1.0kb downstream 3656 true Chr20: 46905295-46908950 Glycine max
Glyma.20G236900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46907951-46908950 Glycine max
Glyma.20G236900 2.0kb upstream 2.0kb upstream 4656 true Chr20: 46903295-46907950 Glycine max
Glyma.20G236900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46903295-46905294 Glycine max
Glyma.20G236900 2.0kb downstream 2.0kb downstream 4656 true Chr20: 46905295-46909950 Glycine max
Glyma.20G236900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46907951-46909950 Glycine max
Glyma.20G236900 5.0kb upstream 5.0kb upstream 7656 true Chr20: 46900295-46907950 Glycine max
Glyma.20G236900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46900295-46905294 Glycine max
Glyma.20G236900 5.0kb downstream 5.0kb downstream 7656 true Chr20: 46905295-46912950 Glycine max
Glyma.20G236900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46907951-46912950 Glycine max
Glyma.20G236900 10.0kb upstream 10.0kb upstream 12656 true Chr20: 46895295-46907950 Glycine max
Glyma.20G236900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46895295-46905294 Glycine max
Glyma.20G236900 10.0kb downstream 10.0kb downstream 12656 true Chr20: 46905295-46917950 Glycine max
Glyma.20G236900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46907951-46917950 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307672 5265 Fabidae View MSA
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9262 0.0 42.0435    
cufflinks 4.55911 0.0 15.0227   Low
cufflinks 23.3394 0.0 63.2639 High High
cufflinks 6.31401 0.0 19.8823   Low
cufflinks 12.2577 0.0 35.2547    
cufflinks 28.024 0.0 75.348 High High
cufflinks 11.7967 0.0 34.1673    
cufflinks 8.37204 0.0 25.3555    
cufflinks 11.5198 0.0 33.3596    
cufflinks 1.828        
cufflinks 17.045     High High
cufflinks 3.928        
cufflinks 5.016        
cufflinks 4.925        
cufflinks 7.666     High  
cufflinks 0.982       Low
cufflinks 9.301     High  
cufflinks 3.277        
cufflinks 1.373        
cufflinks 0.893       Low
cufflinks 18.074     High High
cufflinks 0.932       Low
cufflinks 1.306        
cufflinks 18.763     High High
cufflinks 0.799       Low
cufflinks 22.975     High High

0 Strain